Lolium rigidum (rigid ryegrass): 124678766
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Entry
124678766 CDS
T09103
Name
(RefSeq) nuclear pore complex protein NUP54
KO
K14308
nuclear pore complex protein Nup54
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124678766
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124678766
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124678766
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
CTD
HD_5
Motif
Other DBs
NCBI-GeneID:
124678766
NCBI-ProteinID:
XP_047070580
LinkDB
All DBs
Position
7:215310741..215323985
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AA seq
401 aa
AA seq
DB search
MFGTPSSPPLFGTPSSTSSFGTPSTTPAFGTPSSTPAFGAPSSTPAFGNPSSSPAFGTPS
STPAFGAPSSMPAFWTPSSNPAFGTSSSTLAFGAAPSPSPSPFGFQQQATPSPSPFGFTG
LAGGQITTQMAPVAPLPLLPSDRDIQAIVDAYKEDPGNPRYAFRHLLFSVTDPSQRVKPV
AASDIMWAEAMGKLECMDSADRERLWPQLLQGFKDLSCRLKLQDEVLVSDTERLSMTHSN
VKKLQRHFQADTYPWIQRLKHQELVIERRLLRIMRIVEALENRGFRVQLSKEEADLYERL
VAIIKQIKGTGGDLSKRTYNLLSTSRLLASTGGASGPIYIPNSAKVDEQSVTDLLEALQQ
QTEAVAKLGNVLKRDTRDVEIVLSEDIDMVEDGASRRPLNM
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgttcgggacccccagctcgccccccctcttcgggacgccctcctctacatcctccttc
ggaactccctccaccacccctgccttcggcaccccttcttccacgccggcattcggcgcg
ccgtcgtccaccccagccttcggcaacccctcttccagccccgccttcgggacgccttcc
tcgaccccggcattcggcgcgccctcttcgatgccggcgttttggacgccctcttcgaac
ccagcttttggcacgtcctcgtcgacactggcgttcggagcggcgccgtcgccatcgcca
tcgccgtttggattccagcagcaggctactccgtccccttcgccttttgggttcaccggc
ttggccggtgggcagatcacaacccagatggccccagttgcgcctctgccgctcttgccc
tccgaccgcgatatccaggctatcgtggatgcgtacaaggaggacccaggcaaccctcgc
tatgcttttaggcatctgttgtttagcgtgacagatccttcacaaagggtgaagcctgta
gcagcatctgatatcatgtgggcagaggcgatggggaagcttgagtgcatggatagtgcg
gacagggagaggctgtggcctcaacttttgcaggggtttaaagatctctcatgccggctt
aagcttcaagatgaagttcttgtctcagatactgaacggttgagcatgacccactccaat
gtcaagaagcttcaaagacatttccaagctgacacatatccttggattcaacgcttgaag
catcaagagcttgtcattgagaggcgtctcttaaggatcatgagaatagtggaggcgctg
gagaataggggtttccgtgttcaattatcgaaagaagaagctgatttatatgaaagattg
gttgctataataaagcagataaaaggaactggtggcgatctgtccaagagaacctataat
cttctttctacctcacgtcttctagcaagcaccggtggtgctagtggtcccatttatatt
cctaattcagccaaagttgatgagcaaagtgttactgatcttcttgaggccttgcagcaa
cagacggaagcagttgcgaagttgggcaatgtattaaaaagggacaccagagacgtggaa
attgtactttcggaagacattgatatggtggaagatggtgcttcaagaaggccattgaac
atgtaa
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