Lolium rigidum (rigid ryegrass): 124678918
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Entry
124678918 CDS
T09103
Name
(RefSeq) probable beta-D-xylosidase 2
KO
K15920
xylan 1,4-beta-xylosidase [EC:
3.2.1.37
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd00520
Amino sugar and nucleotide sugar metabolism
lrd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
124678918
Enzymes [BR:
lrd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.37 xylan 1,4-beta-xylosidase
124678918
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_3_C
Glyco_hydro_3
Fn3-like
Motif
Other DBs
NCBI-GeneID:
124678918
NCBI-ProteinID:
XP_047070729
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Position
7:complement(283356965..283359700)
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AA seq
809 aa
AA seq
DB search
MASSLRHRVLSASLLVCAVAFTCVSGSLGPITTNGQNYSKVCDPARFASMGLDMGGFRYC
DASLPYPDRAKDLVGRLTLEEKVRNLGDRAEGAARVGLPPYRWWGEALHGVSDTGPGGTW
FGDVVPGATSFPLVINSAAAFNETLWRAIGGAVSTEIRAMYNLGHAELTYWSPNINVVRD
PRWGRASETPGEDPFLVGRYAVSFVRAMQDIHGHDGATGAADADPFSRPIKVSSCCKHYA
AYDVDAWFTADRYTFDAKVEERDMIETFERPFEMCVRDGDASCVMCSYNRINGVPACANA
RLLTETVRDAWQLHGYIVSDCDSVRVMVRDAKWLGYNGVEATAAAMKAGLDLDCGMFWEG
AQDFFTAFGLDAVRQGKLRESEVDNALKNLYVVLMRLGFFDGIPELQSLGATDVCTEAHK
ELAADGARQGMVLIKNDHGRLPLKAANSVALVGLLQHINASDVMLGDYRGKPCRVVTPYE
GISKVANATSLHACDNGACGAPGGWVKTVDATIVVAGLNMSVEKEGNDREDLLLPWNQTK
WINAVAAASPSPIILVIISAGGVDISFAQNNSKIGAIVWAGYPGEEGGTAIADVLFGKYN
PGGRLPLTWYRNEYIGKIPMTSMALRPVADKGYPGRTYKFYGGPEMLYPFGHGLSYTNFS
YASATTGASVAVKTGAWESCKQLTYKPGTSASPACPAVSVAGHACEEEVSFTLTVSNVGG
RDGSHVVAVYTVPPAEVDDAPRKQLVAFQRVFVPAGGAVQVPVTLNVCKAFAIVEETAYT
VVPSGVSTVLVGDDALSFSFPVKIELAAA
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctcccttcgccatcgcgtgctctcggcctcactccttgtctgtgccgtcgcg
ttcacttgtgtgtccggcagtctcggtccgatcaccaccaatggccagaactacagcaag
gtatgcgacccggcccggttcgcgtccatgggtctcgacatggggggcttccggtactgc
gacgcctcgctgccgtacccggaccgggcgaaggacctcgtcggccggctgacgctggag
gagaaggtgcgcaacctgggcgaccgcgcggagggcgcggcgcgcgtcgggctgccgccg
taccggtggtggggcgaggccctccacggcgtgtcggacaccggccctggcggcacgtgg
ttcggcgacgtggtgcccggcgccaccagcttcccgctcgtcatcaacagcgcggcggcg
ttcaacgagacgctgtggcgcgccatcggcggcgcggtgtcgacggagatcagggccatg
tacaacctggggcacgcggagctcacgtactggagccccaacatcaacgtggtgcgcgac
ccgcgctggggccgcgccagcgagacgcccggcgaggaccccttcctcgtcggacggtac
gccgtcagcttcgtccgcgcaatgcaggacatacatggacacgatggcgccaccggagcc
gccgacgccgaccctttctcccggcccatcaaggtgtccagctgctgcaagcactacgcc
gcctacgacgtggacgcgtggttcaccgccgaccggtacacgttcgacgctaaggtggag
gagcgcgacatgatcgagaccttcgagcggccgttcgagatgtgcgtgcgggacggggac
gcgagctgcgtcatgtgctcctacaaccgcatcaatggcgtccccgcctgcgccaacgcg
cggctcctcaccgagaccgtccgcgacgcgtggcagctccacggctacatcgtctccgac
tgcgactccgtccgcgtcatggtcagggacgccaagtggctcggctacaacggggttgag
gccaccgcggcggccatgaaggccgggctggacctcgactgcggcatgttctgggagggc
gcgcaggacttcttcaccgcattcggcctcgacgccgtgaggcaggggaagctgcgggag
tccgaggtcgacaacgcgctcaagaacctctacgtcgtcctcatgaggcttggcttcttc
gacgggatcccggagctccagtccctcggcgccaccgacgtctgcacggaggcgcacaag
gagctggctgccgacggtgcccggcaagggatggtgctcatcaagaacgatcacggccgc
ctcccattgaaggccgcaaattcagttgcattggtcggccttcttcagcacatcaatgca
tcagacgtcatgcttggagactacagaggaaaaccttgcagggttgtgacgccatacgag
gggataagcaaggtggcgaacgccacgtcgttgcacgcgtgcgacaatggcgcgtgcggc
gcgccgggagggtgggtaaagacggtggacgcgaccatcgtcgtcgccggcctcaacatg
agcgtggagaaggaaggcaacgacagggaggacctcctgctgccatggaaccagaccaag
tggatcaacgcggtggctgcggcctccccgtccccgatcatcctggtgatcatctcggcc
ggcggcgtggacatctccttcgcgcagaacaactccaagatcggcgccatcgtctgggcc
gggtaccccggcgaggaaggcggcacggccatcgcggacgtgctcttcgggaagtacaac
ccgggcgggaggctgccgctgacgtggtacaggaacgagtacatcggcaagatcccgatg
acgtccatggcgctgcgtcccgtcgccgacaaggggtaccccggcaggacctacaagttc
tacggcgggccggagatgctctacccgttcggacacggcctcagctacaccaactttagc
tacgcgtcggccaccaccggcgcgtccgtcgccgtgaagaccggcgcctgggagtcatgc
aagcagctcacctacaagccggggacgtcggcctcgccggcctgcccggccgtcagcgtc
gccggacacgcgtgcgaggaggaggtcagcttcacgctgaccgtgtcgaacgtcggcggc
agggacggcagccacgtcgtggcggtctacaccgtgccgccggccgaggtggacgacgcg
ccgcggaagcagctggtggcgttccagagggtgttcgtgcccgcggggggcgccgtccaa
gtgccggtcacgctcaacgtctgcaaggcgttcgccatcgtcgaggagacggcgtacacc
gtcgtgccgtcgggcgtcagcacggtcctggtcggcgacgacgccctgtcattctccttc
cccgtcaagatcgagctggcagctgcatag
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