Lolium rigidum (rigid ryegrass): 124678944
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Entry
124678944 CDS
T09103
Name
(RefSeq) uncharacterized protein At3g06530-like
KO
K14550
U3 small nucleolar RNA-associated protein 10
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
124678944
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lrd03009
]
124678944
Ribosome biogenesis [BR:
lrd03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
124678944
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_HEATR1
ARM_At3g06530
BP28CT
U3snoRNP10
HEAT
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
124678944
NCBI-ProteinID:
XP_047070750
LinkDB
All DBs
Position
7:complement(70802735..70818878)
Genome browser
AA seq
2154 aa
AA seq
DB search
MASIASQLQAIKSALGSAPEAPRGPITRPSVLFDAKEAADIDLRAILPIALSGLEHLTGV
DERFAKYRKTLFSETSLELNREQQTAKENDKLNKSISSYLRLLAGYLQLPAALKTLEYLI
RRYLVHVYNLDELLLCALPYHDTHAFVRVVQLVNLGNSKWGFLNGVKSSGAPPPRSVIVQ
QCIRDNSLLETLSNYATPTKDFLHSRTVVCFCTAVIVECLGAIPRVDSDIVQKVLGYVFD
SLNPQIRADQDYKAGALMIVGVLATRATLAPKLVQDLILFVARSAQHDALESIDLPWLRV
TVMAIISLVQSQSVHDFRKKPLMILKDIRDFSGVLTVLSSEFNIDNFIRLYVESLVDYSA
SDDSCHVHLIETMETLPIKKFVERIVCKVLGNCIKASQVAQNPDINRTGTWAKKSLVAIE
KKYPLELRDAIRKFLEDSEVNSSGRDSTSKLLSLVFDESESAPADISDSNIWFSLDHPKA
VVRQSALSKIATSGILKKDTVNPQKFINMQDAIIRNLYDDDLSVVQAALSIEGLAAVASP
VGLLKAYDHVLAKCIDIIRKGGSKASKACDVAVSCLEKMVMEYQLHHVEHTKDIATVVFS
LLIIHPKTFRVNLKALELAKKIQWDFYTSSSLVYELTADEMKNMSSESIASINMKNIQAF
AETFLSNPNKHVTWLADSGNGSIFCRTPFLLIVLQALLIPTEVLDKQVNLCQVCLPVLKN
EWSHIQPKGDCIGDEISIDKLEKCIMELVMQIFNNDTEALNAQILVCIFWGLLRVQSSYV
KQNYVIGSSGNIMVDDLFLFFLTSTGKNIFQKHLQHLVINCTRGPFQFISKYLVDEGLSA
GVQAESLFVLASVCSTCALSESSSLDESLCVELLLLFPSLIVPLSHENKDVRSSAVKCVE
ALSLVWQRLSTSVSRNGNSGKLPVCMTSPTFGVLLDSLANQKAMISSDATFLPAYISSML
SPIQDLMVPENLHERFDQPTKNSILYFILRSSMKLSPYGKLMVLSALKGVGSILFEAEVV
KTLFLYLLDHHSRHQNGHDSKQLLSTYETQILCLLLKVLFSVADETNLGFDMSEALLKAL
KVDGLSPKDPVAVMPCLTALQSLQPVFFENLKTDTKEKVFGLLISMFRAENFEIRNATRD
ALLRINVHASTAVKFIELILAQGDKKGNQKRIKREEKPNCDSHFEDYFGEKPLASVLVSL
LDILFLMKDVNQRQCLLQPLCQILSKLLSDQWISGVVCQYTEGLDASSETHDIPSFVKEA
QQLVLLILKDIIDTLQSGHQDKLLNSGNVNLFIKCIRSSDDVGTRNHGFSLIASLAKAFP
QLVTESIVDLFVAIGDAVKQDDSHSQRVMEDLLSVLVPCWLSKTTSIEKLLQIFIKSLAD
VDEHRRLTLMMYLLKTLGEENSLSTVVMYLLYALVERGSHSLSKLQKSHGLPSLSAMSQE
WEYDLAVNITGQYSYTLWFPCLCKLLQEIRMHQKQCLLPMLHLAMQFILVKVQDTELRFE
LEAEEAANSIQNSLGTLMEEVVLCSVKDKKGDISGDILKEVRNSANIILNIITGWMHAST
YFEVITRLLEHPKSLVKRKTLGILCETARANSMVQNKQRKARKLKRSSLSTALQVDKSSC
PYFSELCYKILELIDREVESDTSVKIAAISSLEKLAKEYPSENPAYSKCLVTVINQISSG
DAITSSGLINTAGSLINVLGSKALPQLPLIMTNMLQRAHQVSCCPSGKFAHGSTTTMASF
SSQSTSMLLSVLTTIEVIVQKLGDFVSPYLEGILDLVILHPECAFQIDGKLDVKAADVRR
LLTERVPVRLILSPLLILFPSATKCGEASLSLTFQMIGSLVSTMDRLAVGTYHTKIYEHC
LVALDLRRQQLDSLKNVNLVEESIIQTIIALTMKLTESTFRPLFLRSLEWAESEIDKSTS
KRSMDRAIVFYKLVNKLAEKHRSLFTPYFKYLLEGSVQYLSEDGALVSSKRKKKAKLEDS
KVKDGLSGQKLWNLRALILESLHKCFLYDNDQKILDSSNFQTLLRPIVSQFVVEPPESLE
LVPDAPSVEEVDEIIVLCLGQMAVTARSDVLWKPLNHEVLMQTRSDNVRPKMLGLKVVRY
MVQHLKEEYVVLVPETIPFLGELLEDVELPVKTLSQEILKELETLSGESLREYL
NT seq
6465 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccatcgcctcgcagctgcaggccatcaagtcggccctcggctccgcgccggag
gcgccccgcgggcccatcacgcgcccgtccgtgctcttcgacgccaaggaggccgccgac
atcgacctccgcgccatcctccccatcgccctttccgggttggagcatcttactggcgtg
gacgagagattcgccaagtaccgcaagacgctgttcagcgagaccagcctcgagctcaac
cgcgagcagcaaaccgccaaggagaacgacaagctaaacaagtccatctcctcctacctc
cgcctcctagctggctacctgcagcttccagcggccctcaagacgctcgaataccttatc
cgcagatacctggtgcatgtttacaacttggatgagttgctgctctgcgcgttgccgtac
catgatacgcacgcgtttgttcgggttgtgcagttggtcaacttagggaatagcaagtgg
ggatttcttaatggtgtgaagtcctcgggtgcgcccccgcccaggagtgtcatagtacag
cagtgtatccgtgacaattctttgctggagaccctttccaactacgctacaccgacaaag
gatttccttcactcgaggacagtcgtctgcttttgcactgcagtcattgtggaatgctta
ggagctatccccagggttgattcagatatagtgcagaaggtgttgggatatgtgttcgac
tcacttaatcctcaaattagggcagaccaagattacaaggctggagcgctaatgattgtt
ggagtactggcaacacgagcaactctggcgccaaaacttgttcaagacttgatcctcttt
gttgcaaggtctgcgcagcacgatgcattggagtcgatcgatttaccgtggcttcgtgtt
acagtgatggctattataagtctagttcagtcacagtctgtccatgacttccgtaagaag
ccattgatgattctaaaagacatcagggatttttctggtgtacttactgtattatccagt
gagttcaacattgataattttattaggctttatgttgagtcattggttgattacagtgct
tctgatgattcctgccacgtgcaccttattgaaaccatggagactctacctattaagaag
tttgttgaaaggatcgtgtgcaaggttcttggcaactgtatcaaggcatcacaggttgca
caaaatccagatataaaccgcacaggcacatgggcaaagaagagcttggttgcaattgaa
aaaaaatatccacttgagctacgggatgctatccggaaatttcttgaggactctgaagtt
aactccagtggaagggattctacttccaagttgctcagcttagtgtttgatgaaagcgag
agtgcgccggctgacatatctgattctaacatttggttcagtctggatcatcctaaggct
gtggtccgtcaatctgctctctcaaaaattgccacatctggcattttgaagaaagatact
gtaaatccacagaaatttatcaatatgcaagatgcaataatacgcaatctgtatgatgat
gatctaagtgttgttcaagctgccttatccatagaagggctagctgctgttgccagtcct
gttggccttctaaaagcgtatgatcatgtacttgccaaatgcatcgacatcattcgcaaa
ggtggttcaaaagcatcaaaagcttgtgatgttgctgtttcttgtctggaaaagatggtt
atggaatatcagttgcatcacgtggaacatacgaaggacatagctacagtagtattcagt
ctccttattattcacccaaagaccttcagggtaaacttgaaggccttggagctagctaag
aaaatacaatgggatttctacactagtagttctcttgtctatgagctaacagctgatgaa
atgaagaacatgagttccgagtccatagcctccattaacatgaagaacatccaagctttt
gctgaaacttttctatcaaacccaaataaacatgtcacatggttggctgactctggaaat
ggaagtatattttgcagaaccccgtttctactcatagtattgcaagctttgcttattcct
actgaagttttggacaaacaggtgaatctgtgccaagtttgtttgccagttctgaagaac
gaatggtctcacatacagccaaaaggtgattgtattggcgatgagatcagcattgacaag
cttgagaagtgcattatggaattagtgatgcagatttttaataatgacacggaagcattg
aatgctcaaattcttgtctgtatattctggggtctgcttagggtgcagtcttcctatgtt
aagcagaattatgtgattggttctagtggaaatataatggttgatgatttgtttttgttt
ttcctcacatcaactggcaaaaatatcttccagaagcacctacagcatcttgttattaac
tgcacacgaggaccttttcaatttatctcgaagtaccttgtggatgaaggtttgtctgct
ggagttcaagcagagtctctttttgtgcttgcatctgtttgttctacttgtgctttatct
gaaagtagtagtttggatgagagcttgtgtgtggagcttctacttttgttcccttctctc
attgttccactttcgcacgaaaataaggatgtaaggtcctctgctgtgaaatgtgttgag
gcattatctttggtgtggcagcgcttgagcacttccgtctcaagaaatggaaacagtggc
aaattgcctgtatgcatgacatctccaacatttggtgttctccttgattcattggctaac
caaaaggccatgatatcctcggatgcgacatttctaccagcttatatttcgtcaatgctt
agcccaattcaagatctgatggttcctgaaaatcttcatgaaagatttgatcagccgaca
aaaaatagtatcctttatttcatcttgcgctcttctatgaagctctctccttatggaaag
ttgatggttctgtcagccctcaaaggagtaggaagcatcttatttgaggcagaagtggtc
aagactttgttcttgtatcttctggaccatcatagtcgccatcagaatggacatgattct
aagcagttgttatctacctatgaaacacaaatcttgtgcttgcttttgaaggttttgttt
tcagtggcagatgaaacaaatcttggttttgacatgtctgaggctctattgaaagcatta
aaggttgatggtttgtccccaaaagatcctgttgctgtgatgccttgccttactgccctg
caaagtcttcaacctgtattctttgaaaatttgaagaccgatactaaggaaaaagtattc
ggtctacttatttctatgtttcgagctgagaatttcgaaattcgaaatgccacacgagat
gctctactgcgaattaatgttcatgcatccactgctgtgaagttcattgaattgatttta
gcgcaaggtgataaaaaaggaaatcaaaaaagaataaagagggaggagaaacctaactgt
gatagccattttgaagattattttggggaaaaacctctggcttctgttcttgtttctctt
ctggatattctttttcttatgaaggatgtgaatcagaggcaatgtttactgcaaccactt
tgccagattctatcaaagcttctttctgatcaatggatttcaggggtagtttgtcagtat
actgaaggccttgatgcgtcttctgaaactcatgatatacccagttttgtaaaggaagca
cagcagttggtactgcttattcttaaagatattatcgatacactgcagtcgggtcaccaa
gataaattgctcaacagtggaaacgtaaatctctttatcaagtgcataaggtcttcagat
gatgtagggactcgtaaccatggattttcattgattgcatctttagccaaggctttcccg
caactggttacagaaagcattgttgatttgtttgttgctattggggatgcagtgaaacag
gacgatagccattcacaacgtgttatggaggatttattatctgtactagtcccatgttgg
ttatcaaagactacaagtatagaaaagcttcttcagatattcattaaatctttggctgat
gttgacgaacatagacgcctgaccctcatgatgtaccttttgaagaccctaggagaagag
aatagtttgagtactgtggttatgtatttattgtacgcgttagttgagaggggttcacac
tctctttcgaaactccagaagagtcatggtctcccatccttgagtgccatgtcacaagag
tgggaatatgatttggcagtcaatattacgggccagtattcctatacattatggtttcct
tgtctctgtaagctactacaagaaatcaggatgcatcagaaacaatgcttgcttcctatg
ctacatttggcaatgcagtttattctagttaaggtgcaagatacagagttgaggtttgag
cttgaagctgaggaagctgctaattccatccagaattctcttggaacacttatggaggaa
gttgtcttgtgctctgtcaaagataaaaaaggagacatttcaggtgatattctaaaggaa
gtcagaaactctgcaaatattatccttaacataattacgggatggatgcatgcttcaaca
tatttcgaagtaattactcgtctgttagagcatcctaaaagtcttgtgaaaagaaagaca
cttggaatattgtgcgaaactgcaagggcaaatagcatggtccagaacaagcaaagaaaa
gcaagaaaactgaagcgcagctctctgtctactgccctccaagttgacaagagctcttgc
ccatatttcagcgaattgtgctataagattctagagttgattgacagagaggttgagtcg
gacacgtctgtgaaaattgctgctatttcttcactcgagaaactagctaaagaatatccc
tctgaaaatcctgcatatagcaagtgccttgtgacagtcattaatcagattagctcgggt
gatgctataacttcttctgggttaataaatactgcggggtctctaattaatgtgcttgga
tcaaaagcattacctcagctcccacttatcatgacaaacatgctgcaaagagcacatcag
gtgtcatgttgccctagtggaaaatttgctcatggttccactacaactatggccagcttt
tctagccaatctacaagtatgttgttatctgtacttacaactattgaggtgattgtacaa
aagcttggggactttgttagtccatatttggaaggaatactggatctagtgatactgcat
cctgaatgtgcttttcaaattgatgggaaattggatgtaaaagcagcagatgttcggagg
ctactgacagagagagttccagttcggctgattctttcacctctacttattttgttcccc
agtgctaccaaatgtggagaagcaagcctgtcattgacattccaaatgattggaagtcta
gttagtacgatggatcggttggctgtaggaacttaccatacaaaaatttatgaacactgt
ttggtagctcttgatctccgtcgtcaacagctggactctttgaagaatgtaaatttagtg
gaggaaagcattatccagaccattattgctctcacgatgaaactcactgagtccactttt
aggcctcttttccttcgtagtcttgaatgggcagagtctgaaattgataagtccacatca
aagagaagtatggaccgtgcaattgttttctacaaattggtcaacaagcttgctgaaaaa
cacaggtccttgtttacaccttacttcaagtacctgcttgagggatccgtacaatatcta
tcagaagatggtgctttggtcagttccaagcgaaagaagaaggctaaactcgaagacagt
aaagtcaaggatggcctatcaggacaaaaactgtggaacctaagagctctgatattggaa
tccttacacaagtgctttctttatgacaatgatcagaagatcctagattcctcaaatttt
cagactcttttgaggcccattgtttctcagtttgttgtggaaccgcctgaatctcttgaa
ttagttccagatgctccatcagttgaagaagtggatgagattattgttttgtgcttgggg
caaatggcagtgaccgctcggtcggatgttctgtggaagcctcttaaccatgaggtgcta
atgcagacaaggagtgacaatgttcgccctaagatgctaggcctgaaggttgtgaggtac
atggtccaacatctgaaggaggagtacgtggttctggtaccggagaccatcccgttcctt
ggtgagttgctcgaggacgtcgagcttcctgtgaagacgctgtcccaggagatactgaaa
gagctcgaaaccctcagcggtgagagcctccgggagtacctgtga
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integrated database retrieval system
