Lolium rigidum (rigid ryegrass): 124680506
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Entry
124680506 CDS
T09103
Name
(RefSeq) transcription initiation factor TFIID subunit 12b-like
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124680506
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lrd03021
]
124680506
03036 Chromosome and associated proteins [BR:
lrd03036
]
124680506
Transcription machinery [BR:
lrd03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
124680506
Coactivators
SAGA/TFTC/STAGA complex
124680506
Chromosome and associated proteins [BR:
lrd03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
124680506
STAGA complex
124680506
TFTC complex
124680506
SAGA complex
124680506
SLIK complex
124680506
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIID_20kDa
DUF494
RecX_HTH2
Motif
Other DBs
NCBI-GeneID:
124680506
NCBI-ProteinID:
XP_047071510
LinkDB
All DBs
Position
Unknown
AA seq
440 aa
AA seq
DB search
MADPPSAATTASQQPDQFAASVLNQHQQNPNRQFSPQIPLSPAVSDPASAAAGGRSMDLQ
PRLQAPSPPQAAEGSGGLSAMHRSGPASRAPAVGQPPRYAAAGATYGAQVSFPAGVAQAM
LGAQGQPRTLQGQDNRARYGLQFQPPMMAQPGQRGLVQGTQFSAATAQAMGGITGMNQMR
TNPYGAQAQQRFAQMRPQQPSSQNGAMVQMLPTQQAQSSMASPLSPHQIQQRFAQQMRPQ
QLPAGSSQNGPMVQMSPTQQMQAAMASPLPPNQLQRDQMMQLVQQLQQRGLNRQQIAQAL
QRLPHLNAQHLNQQQRQQQQPSPRMPAPASQPMTPSSGGTMAAGAANALHRGPPGGNVSQ
LLGKRKVQDLVAQVDPLCEVDPEVEDLILEIADDFISSAVAFACRLAKHRKSSVVEAKDV
LLHLQKNCHLSVPGFSQERK
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggccgatccgccgtccgcagccaccaccgcatcgcagcagcccgaccagttcgctgcc
tctgtcctcaaccagcaccagcagaaccccaaccgccaattctccccccaaatccccctg
tcccctgccgtatccgacccggcgtcggctgctgcggggggcagatccatggacctccag
ccgcggttgcaggcgccttctcccccgcaggcggcggaaggctccggaggcttgagcgcg
atgcaccgctcgggcccggcctcccgggcccctgccgtcggccagcctccacggtacgcg
gcagccggcgcgacgtacggcgcgcaggtgagcttcccggccggcgtagcgcaggccatg
cttggcgcgcaggggcagccgaggacgctgcaagggcaggataacagggcgcggtacggg
ctccagttccagccaccgatgatggcgcagccagggcagaggggcctagtacaaggcaca
caattcagtgccgccactgcacaagccatgggaggtattaccgggatgaaccagatgagg
actaacccgtatggcgctcaagctcagcagcgtttcgcccaaatgaggccacagcagcca
tcatcacaaaatggagctatggtgcagatgttgccaacgcagcaggcgcaatcgtcgatg
gcctctcctctttctccgcatcaaattcaacaacgttttgcgcagcaaatgaggccacag
cagctacctgcaggatcatcacaaaatggacccatggtgcaaatgtcgccgacgcagcag
atgcaagcggcgatggcctcacctcttcctccgaatcaacttcagcgagatcagatgatg
cagctggtacaacaacttcagcagagggggctgaatagacagcagattgcccaggcgctg
caacggctcccccacctgaatgcccaacacctgaaccagcagcagcgtcagcaacagcaa
ccatctccaaggatgccagcacctgcctcccagccgatgacaccttcctcaggcggaacc
atggccgctggtgcggcaaatgctctccatagaggaccacctggaggaaatgtcagccag
cttcttgggaagagaaaggtacaggatttggttgcgcaggtggatccgctctgcgaggtc
gatccggaggtggaggatctgattctggagatcgccgatgacttcattagctccgcggtc
gcgttcgcgtgcaggctcgcaaagcacaggaaatcgtcggtcgtggaagctaaggatgtg
ctgctgcacctccagaagaattgtcacctgtctgttcctggtttctcacaggagaggaag
tga
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integrated database retrieval system
