KEGG   Lolium rigidum (rigid ryegrass): 124680833
Entry
124680833         CDS       T09103                                 
Name
(RefSeq) putative E3 ubiquitin-protein ligase RING1a
  KO
K10695  E3 ubiquitin-protein ligase RNF1/2 [EC:2.3.2.27]
Organism
lrd  Lolium rigidum (rigid ryegrass)
Pathway
lrd03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:lrd00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    124680833
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lrd04121]
    124680833
   03036 Chromosome and associated proteins [BR:lrd03036]
    124680833
Enzymes [BR:lrd01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     124680833
Ubiquitin system [BR:lrd04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    124680833
Chromosome and associated proteins [BR:lrd03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Canonical PRC1 (PRC1.2/1.4)
     124680833
    Noncanonical PRC1 (PRC1.1)
     124680833
    Noncanonical PRC1 (PRC1.3/1.5)
     124680833
    Noncanonical PRC1 (PRC1.6)
     124680833
SSDB
Motif
Pfam: zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-RING_UBOX zf-RING_5 zf-C3HC4_3 zf-C3HC4_4 zf-RING_4 zf-RING_6 zf-UDP zf-rbx1 zf-Nse TRAF3_RING zf-RING_11 zf-C3HC4_5 zf-RING_10 ZNF512_C2HC
Other DBs
NCBI-GeneID: 124680833
NCBI-ProteinID: XP_047071829
LinkDB
Position
Unknown
AA seq 479 aa
MPSQKRQLPSPSSKPRDHVEEANGTADASTAGGGGGGLRLVPGGGAANRATDPQPQRVRD
SGSPKRGGGGGAYSDSESSQSDGGMDEFILVKLAEIRKEVQCPICLGIIRKTRTVMECLH
RFCRDCIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALIATLYPDIDKYEEEEFAFSE
EEKTRNKKIQATIEETVRKQSEAMGKKSSTAKATANAFARKYRRNVRTRGRGRTVARDIV
HAVSDDEGRKEVNSNDASKDPSSADNHSPDLKQKRGRKRPAPLPSPVRTMGIATSDHGSE
ENDELVSVKENFTTSPLRGEMLAWGKNGTRSQTRYGNVGGLNGRLGKSGRVAKLVEHLRT
TDEMDKEFNLYLVLLPLDGQTTPKLEKPYLSCQPTVSIRHLVQLIALQLSRQVEELEIYI
RMDLHRRGVATDSSSAETKLRLLDGLERLREDKLLSDLHPSFASGRNDLELLYALKTQD
NT seq 1440 nt   +upstreamnt  +downstreamnt
atgccctcgcagaagcgccagctcccttcgccgtcctccaaaccccgcgaccacgtggag
gaggccaacgggacggcggatgcttccacagccggcggcggagggggagggctccgcctg
gtgcccggcggaggcgccgccaatcgggccaccgacccgcagccgcagcgcgtacgcgat
tcaggaagccccaaacgcggcggaggcggcggcgcgtacagcgacagcgaatcgtcgcag
agcgacggcggcatggacgagtttatactagtgaaattagctgaaatacggaaggaagtc
cagtgccctatttgtttaggcattatccggaagacaagaacagttatggaatgtttgcac
cgtttctgcagggattgcattgataaatctatgcggctaggaaataatgagtgcccagca
tgccgcactcattgtgcgagcagacgttctttgagggatgatcctaattacgatgcattg
attgcaaccttgtacccagatattgataagtacgaggaagaggaatttgctttcagtgaa
gaggagaagactcggaacaagaagattcaagcaaccattgaagaaacggttcgaaaacag
tcagaggccatgggtaagaaaagttccacagcaaaagccactgccaatgcttttgcaagg
aagtacaggagaaatgtgcgaacacgtgggagaggtagaactgttgctcgtgatattgtc
catgctgtctccgatgatgagggtagaaaagaagtaaattctaatgatgccagcaaagac
ccgtcttctgctgataaccactctccagatttaaagcagaaaagaggtagaaagaggcct
gcaccactaccttctcctgttagaaccatgggtattgccactagtgaccatggatctgag
gagaatgatgaactagtatctgtaaaagaaaatttcaccacctctccattgcggggagag
atgctcgcatggggcaaaaatggtacgcgaagccaaactcgatatggcaatgttggcggc
ttaaatggcaggcttggaaagagcggacgtgttgcgaaattagtcgagcacctgcgtaca
actgatgaaatggataaagagttcaacttgtatcttgttctccttcctcttgatggacaa
acaacacctaaattggaaaagccctatctaagttgtcaaccaactgtatccattcgacat
cttgtacagctcattgctctccagttgtctcgccaagttgaagaacttgagatatacata
aggatggacctccacagaagaggtgttgcaacggactcaagttctgctgagacaaaactg
cggctacttgatggcttggaaagattgagagaagataaacttctttctgatcttcaccct
tcatttgcctctggtcgcaatgatctggaattgttatatgctttgaaaactcaagactag

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