Lolium rigidum (rigid ryegrass): 124681129
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Entry
124681129 CDS
T09103
Name
(RefSeq) homeobox-leucine zipper protein ROC6-like
KO
K09338
homeobox-leucine zipper protein
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lrd03000
]
124681129
Transcription factors [BR:
lrd03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
124681129
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
124681129
NCBI-ProteinID:
XP_047072037
LinkDB
All DBs
Position
Unknown
AA seq
870 aa
AA seq
DB search
MSFGGMFDGAGSGVFSYDAGGGGAGMHNPAGRLLPSPNLPRPGGAGGFSSSTGLSLGLTN
MEGGQLGDPNRLGGLLGSAGSVGDGSDSLVRGREDENDSRSGSDNLDGASGDELDPDNGN
PRKKKKRYHRHTPQQIQELEAVFKECPHPDEKQRMELSRRLNLESRQVKFWFQNRRTQMK
TQIERHENALLRQENDKLRTENMTIREAMRSPMCGNCGGAAVLGDVSLEEQHLRIENSRL
KDELDRVCALAGKFLGRPVSAISSPLSLPSSLSGLDLAVGSANGGFMGGGSVLQSIPDLM
GGGPAGMRLPAGMIGGGLDDGVGGAGDAMDRGVLLELGLAAMEELVKVAQVDEPLWLPTS
LDTSAGGGFGQQQALESGGFQTMNFEEYRRAFARVLGPSPAGFVSEATRDVGVAIVSSVD
LVSSLMDAGRWSEMFPCVVARASTMEMISSGMGGTLSGSIQLMRAELQVLSPLVPIREVT
FLRFCKQHAEGLWAVVDVSVDGVLRPNDGAAAAGYMGCRLLPSGCVVEDMRNGYSKVTWV
VHAEYDEAAAHELYRPLLRSGQALGARRWLASLRRQCEYLAILCSNPLPSRGDGHHEAIS
PVGRRCMLKLAQRMADNFCAGVCATAAQKWRRLDEWRVEGGDQQPRGAGGEDKVRMMARQ
SVGAPGEPPGVVLSATTSVRLPSTSPQRVFDYLRDEQRRGEWDILANGEAMQEMDHIAKG
QHHGNAVSLLRPNATSGNQNNMLILQETCTDPSGSLVVYAPVDVQSMHVVMGGGDSAYVS
LLPSGFAILPDGYSNAVTPDPTSQLGSSPDVQGGSNNINTGSLVTVAFQILVNNLPTAKL
TVESVDTVSNLLSCTIQKIKSALQANIISP
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcggcggcatgttcgacggcgccggctccggcgtcttctcctacgacgccggc
gggggcggcgccggcatgcacaacccagctggccgcctcctgccctcgccgaacctcccc
agacccggtggcgccggcggtttctcatcctccaccggcctctcccttggcctgacgaac
atggaaggtgggcagctcggcgatccgaaccggctcggcggtctgctgggcagcgccggg
agcgtcggcgacggcagcgactcactggtccgcgggcgggaggacgagaacgacagccgc
tccgggagcgacaacctcgacggcgcctccggcgacgagctcgatccggacaacggcaac
ccgcgcaagaaaaagaagcgctaccaccgccacacgccgcagcaaatccaggagctcgaa
gctgtgttcaaggaatgccctcaccccgacgagaagcagcggatggagctcagccggcgg
ctcaacctggagagccgccaggtcaagttctggttccagaatcggcgcacacagatgaag
acgcagatcgagcgtcacgagaacgcgctgctgcggcaggagaacgacaagctgcgcacc
gagaacatgacgatccgggaggcgatgcggagcccgatgtgcggcaactgcggcggcgcg
gcggtgctgggcgacgtgtcgctcgaggagcagcacctgcgcatcgagaactcgcgcctc
aaggacgagctggaccgcgtgtgcgcgctggcgggcaagttcctgggccggcccgtgtcc
gccatctcgtccccgctgagcctcccgtcgtcgctctccgggctcgacctcgccgtcggc
agcgccaacggcggcttcatgggcggcggctccgtgctgcagtctatcccggacctgatg
ggcggcgggccggcgggcatgcggctgcccgccggcatgatcgggggcgggctggatgat
ggtgttggtggcgcgggtgatgcaatggaccgcggcgtgctgctggagctcgggctggcg
gccatggaggagctggtgaaggtggcgcaggtggacgagccgttgtggctgcccaccagc
ctggacaccagcgcaggcggcgggttcggccagcagcaggcgctggagagcggtgggttc
cagacgatgaacttcgaggagtaccggcgcgcgtttgcccgcgtgctcggccccagcccc
gccggcttcgtctccgaggccacccgcgacgtcggcgtggccatcgtcagcagcgtcgac
ctcgtgagcagcctcatggacgcgggtcggtggtcggagatgttcccgtgcgtggtggcg
cgggcgagcacgatggagatgatctcgagcggcatgggcggcacgctcagcggctcgatc
caactgatgcgcgcggagctgcaggtgctgtcgccgctggtgccgatccgggaggtgacg
ttcctgcggttctgcaagcagcacgcggagggcctctgggccgtcgtcgacgtctcggtg
gacggcgtcctccgtcccaacgacggcgccgccgcggcggggtacatgggctgccgcctc
ctcccctccggctgcgtcgtggaggacatgcgcaacggctactccaaggtcacgtgggtg
gttcacgccgagtacgacgaggccgcggcgcacgagctgtaccggcccctgctccgctcc
ggccaggccctcggcgcgcgccgctggctcgcctcgctgcggcgccagtgcgagtacctc
gccatcctctgctccaacccgctgccctcgcgcggcgacggccaccacgaggccatctcg
cccgtcggccgccgctgcatgctcaagctggcccagcgcatggccgacaacttctgcgcc
ggggtctgcgccacggcggcgcagaagtggcgccgcctcgacgagtggcgcgtcgagggc
ggcgaccagcagccgcgcggcgccggcggggaggacaaggtcaggatgatggcgcgacag
agcgttggcgcgcccggggagccgcccggcgtcgtgctcagcgccaccacctccgtcagg
ctgcctagcacgtcgccgcagcgcgtcttcgactatctccgcgacgagcagcgccggggc
gagtgggacatcctggctaacggcgaggccatgcaggagatggaccacatcgccaagggc
cagcaccacggcaacgccgtctcactcctccgtcccaacgcaacgagtgggaaccagaac
aacatgctcatcttgcaggagacatgcaccgacccgtccggctccctggtggtgtatgcc
cccgtggacgtgcagtccatgcacgtcgtcatgggcggcggcgactcggcttacgtctcc
ctcctgccctccggcttcgccatcctccctgacggctacagcaatgccgtcactccggac
cctacctctcagctgggctcgtcgccggacgttcaaggtggcagcaacaacatcaacacc
gggtcactcgtcacggtggcattccagattctggtgaacaacctgccgacggccaagctc
accgtcgagtcggtcgacaccgtgagtaacctactctcctgcaccatccagaagatcaag
tccgccctgcaggcaaacatcatctcgccctag
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