Lolium rigidum (rigid ryegrass): 124681240
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Entry
124681240 CDS
T09103
Name
(RefSeq) nuclear pore complex protein NUP98A-like isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124681240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124681240
03036 Chromosome and associated proteins [BR:
lrd03036
]
124681240
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124681240
Chromosome and associated proteins [BR:
lrd03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
124681240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
124681240
NCBI-ProteinID:
XP_047072132
LinkDB
All DBs
Position
Unknown
AA seq
923 aa
AA seq
DB search
MFGSTNPFGQSSGSAFGQTSSNPFGAQSGFGQTSTPANNPFGSPTPAFGAPQPGAASPFG
ATPSAGAFGQPSAPAFGATSTPAFGAASTGGFGQPSTPAFGTPSSSPFGTSTPAFGASST
PAFGTASSSFGSGSLFGQKPSFGGFGSSPSQSSPFGGAFQQTQPAFGNTTFGATTTPAFG
TTPTPAFGATTTPAFGSTSTSLFGASSTPAFGSTPFGSTTTPAFGASGSTTAFGVSSAPA
FGASTTPSFGASTSAFSFGSSPSFGQTAAAAGTTPFGTTPSPFGAQTSPFGGQTAAPAFG
QASFGNQSGGTRVQPYAQTPDADSATSGQPAAKLNSISAMPAYKDKSHEELRWEDYQRGD
KGGPNTSVAPVANSFASPQPIFQANPTTPANPFAKASTGGFGATPNPFSSATIASFGQTS
SSAFSANTSPSLFGNTTTSLFSTPSTTTNPFNTGLSINNTQSAGLFQSSPAMTQQPFSQS
FNQQSSTPAFSTGMFNTSNPGMTGGLFSNTSSPFQTPTFPQSAPAQTPSLFSFPQTQQAS
AGGFSGVGGFSGVSNTLNLGQFGQQTTAQSNMVMQPTLISNPFGTLPAMPQMSIGNGGSS
PSIQYGISSLPVSEKPLPSRAVSMVVPRHLSQRRIKLLPRKYNQTSDGKVPFFADDEESS
VTPKADAFFIPRENPRSLVIRPTEQLRSRSAVDRQSIPSVSTDLGKQKDVLVSRERNKAS
MSPTGSDPVENGIYRDGHHNVSNKPEAEARYVNGSSVDKLMPKLSQADYFMEPSLEELAA
KERAEPGYCCRVRDFVVGRQGYGSIKFLGETDVRGLDLESIVEFNNREVIVYKDESKKPP
VGEGLNKAAVVTLLNIKCVNRKTNEQYTEGPRVDKYKEMLVKKAEEQGVEFISFDAVKGE
WKFKVKHFSSYGFAEAESGLVDS
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgttcggctccaccaatccgttcgggcagtcgtccggcagcgccttcgggcagacctcc
agcaaccctttcggggcccaatcggggttcggccagaccagcacccccgccaacaatccc
ttcggcagccccacccccgccttcggggcgccgcagcccggggccgcctcgcctttcggc
gccaccccctccgccggcgccttcggccagccgtccgctccggccttcggggccacatcc
accccggcgttcggcgccgcgtcgaccggcggatttggccagccatccacgccggcgttc
ggtaccccgtcgtcctccccgttcgggacctccacgccggcctttggcgcatcgtcaacc
cctgcgtttggcaccgcgtcctccagcttcggcagtggatctttgtttggacaaaagcca
agttttggtggtttcggatcatctcccagccagtctagtcctttcggtggcgcattccag
caaacacaaccagcatttggcaataccacttttggcgccacaactacgccagcctttggc
accacgcccacgccggcctttggtgccacaaccaccccggcatttggttcgacatcaaca
tccctattcggtgcttccagcacaccagcatttggttccacaccctttggttcaaccaca
actcctgcttttggagcttcaggttctaccacagcgtttggtgtgagtagtgctcccgct
tttggagcttcaaccacaccttcgtttggcgcatcaacaagtgcttttagttttggttct
tcgccgtcatttggacagacagcagctgcagccggtactactcctttcggaacaactcct
tcaccttttggggcacaaacttctccgtttggtggacagacagcagcaccggcgtttggg
caagcttcatttggaaatcaatctggaggaaccagagtacagccttatgcgcaaacacca
gatgctgacagtgctacaagtggtcaacctgctgcaaaacttaattctatatcagccatg
cctgcgtacaaagacaagagtcatgaagaattgaggtgggaagattaccagcggggagac
aaaggtggaccaaacacttctgtagcaccagttgcaaacagctttgcgtctccacagccg
atttttcaagcaaatccaacgacaccagcgaacccattcgctaaggcctctacaggtggt
tttggtgctactccgaacccattttcgtcggccacgattgcctcatttggtcaaactagc
agttctgcattttccgcaaacacttcaccatctctgtttggaaatactactacttcacta
ttcagcacgccatcgacaaccacaaatccattcaacactggcttatccattaataacact
caatcagctgggctgtttcagtcttcacctgcaatgacgcagcagccatttagccagtct
tttaaccagcaatcaagcactccagctttctccactggtatgttcaacacatctaaccct
ggaatgactggagggctgtttagcaacacatcttcaccttttcaaacaccaacatttcca
caatctgcccctgctcaaacaccaagcttgttctcattccctcagactcaacaagcttct
gcaggtggattctctggtgttggaggattctctggtgtttccaacacactgaatctgggc
cagttcggacagcaaaccactgcccagtccaatatggtcatgcagccaactcttatttcg
aatccctttgggacacttcctgcaatgcctcagatgtccattgggaatggtggatcctct
ccctctatccagtatggaatatcaagcttgccggtttctgagaagcctctcccgagcaga
gcagtatccatggttgttcctaggcatttgtcacagaggaggataaaactgttgccacgg
aaatataatcagacatctgatggaaaggttccattctttgctgatgatgaagaatcttct
gtgacaccaaaagcagatgcctttttcatccctagagagaacccgagaagtctggtaatc
cgtccaactgaacagttgcgttcacgtagtgcggttgacaggcaatcaataccgagcgtt
tcaactgatcttggcaaacaaaaagatgttttggttagcagggagcgcaacaaggcttcc
atgtcaccaactgggtctgatccagtggaaaatggcatctaccgcgatggccaccacaat
gtatcaaataagcccgaggctgaagcacggtatgtgaatggttcttctgttgacaagctc
atgcctaagctctcccaggcagattacttcatggagcctagtctagaggagcttgccgcc
aaagaacgtgctgaaccaggctactgctgccgggtgagagattttgttgtcgggcgccaa
ggctatggcagcatcaaattcttgggagagactgatgtaaggggccttgatctggagtca
atcgtggagttcaataaccgtgaagtgattgtgtacaaggacgagagcaagaagcccccg
gttggtgagggcctgaacaaagctgctgtggtgactcttctgaacatcaagtgtgttaac
aggaagacaaacgagcagtacacggagggtcctagggtggacaagtacaaggagatgctg
gtgaagaaagctgaggagcagggcgtggagttcatctcgtttgacgctgtcaagggtgag
tggaagttcaaggtgaagcacttcagctcctacgggtttgctgaagctgaatcaggcctg
gtcgattcctag
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