Lolium rigidum (rigid ryegrass): 124681253
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Entry
124681253 CDS
T09103
Name
(RefSeq) DNA polymerase delta catalytic subunit-like
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03030
DNA replication
lrd03410
Base excision repair
lrd03420
Nucleotide excision repair
lrd03430
Mismatch repair
lrd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
124681253
03410 Base excision repair
124681253
03420 Nucleotide excision repair
124681253
03430 Mismatch repair
124681253
03440 Homologous recombination
124681253
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lrd03032
]
124681253
03400 DNA repair and recombination proteins [BR:
lrd03400
]
124681253
Enzymes [BR:
lrd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
124681253
DNA replication proteins [BR:
lrd03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
124681253
DNA repair and recombination proteins [BR:
lrd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
124681253
MMR (mismatch excision repair)
DNA polymerase delta complex
124681253
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
DNA_pol_B_2
divDNApol
REV3_N
Motif
Other DBs
NCBI-GeneID:
124681253
NCBI-ProteinID:
XP_047072143
LinkDB
All DBs
Position
Unknown
AA seq
1101 aa
AA seq
DB search
MSSAGKRRAAPAAAPSAAAAKRAHPTPPGASKPPPPAPAAAAEEEDMMDEDVFLDETILE
EDEAALLLLDRDEALASRLSRWKRPALPADLVSGCSRSVAFQQLDIDYVIGESHKELLPK
SSGPAAIIRIFGVTREGHSVCCQVHGFEPYFYISCPSGMGPDDISRFKQILEVRMKESNR
SSNVPKFVKSVELVQKQTIMHYQPQKSQSFLKIVVTLPTMVASCRGILERGITMEGLGSK
SFLTYESNILFALRFMIDCNIVGGNWLEVPAGKYRKAARIMSYCQLELDCLYSDLVSHAA
EGEYSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQIANLLTLQGEAQPFVRNVMTLKSC
SPIVGVDVMSFDTERDILLAWRDLIREADPDIIIGYNICKFDLPYLIERAEVLKIVEFPL
LGRIRNSRVRVRDTTFNSRQYGTRESKDVTLEGRVQFDLLQAMQRDYKLSSYSLNSVSAH
FLGEQKEDVHHSIISDLQNGNSETRRRLAVYCLKDAYLPQRLLDKLMYIYNYVEMARVTG
VPISFLLSRGQSIKVLSQLLRKAKQRNLVIPNMKGQGSGQDTFEGATVLEARAGYYEKPI
ATLDFASLYPSIMMAHNLCYCTLVPPEDVRKLNLPPESLYKTPSGEIFVKQELQKGILPE
ILEELLAARKRAKADLKEAKDPFERAVLDGRQLALKISANSVYGFTGATVGQLPCLEISS
SVTSYGRQMIEHTKKLVEDKFTTLNGYEHNAEVIYGDTDSVMVQFGVSTVEDAMKLGREA
ADFISETFIKPIKLEFEKIYFPYLLISKKRYAGLYWTNPEKFDKMDTKGIETVRRDNCLL
VKNLVTECLHKLLVDRDIPGAVQYVKNTISDLLMNRVDLSLLVITKGLTKTGEDYAVKAA
HVELAERMRKRDAATAPTVGDRVPYVIIKAAKGAKAYEKSEDPIYVLDNNIPIDPHYYLE
NQISKPLLRIFEPILKNASRELLHGSHTRAVSISTPSNSGIMKFAKKQLTCLGCKAVISG
PNQTLCSHCKGREAELYCKTVANVSDLEMLFGKLWTQCQECQGSLHQDVLCTSRDCPIFY
RRRKAQKDMAEARVQLDRWDF
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atgagctcagccggcaagcggcgggcggcgcccgccgcagcgccctccgcggcggcggcg
aagcgggcccaccccacgccgcccggcgcctcgaagccgcctccgccggctcccgctgcg
gcggcggaggaggaggatatgatggacgaggacgtgttcctggacgagactatcctggag
gaggacgaggcggcgctgctgctgctcgaccgggacgaggccctcgcctcccgcctctcc
cgctggaagcgccccgccctcccagccgacctcgtctccggttgctcccgctccgttgct
tttcagcagctggatatagattatgttattggtgagagccacaaagagttgcttcccaaa
tcttccggcccggcagctataatcaggatttttggtgtcaccagagaaggtcacagtgtg
tgctgccaggttcatgggttcgaaccatatttctacatcagctgcccatcaggcatgggt
cctgatgatatttcacgcttcaaacaaatactagaggtgaggatgaaggaatcaaatagg
agtagcaatgtgccaaagttcgtgaagagcgttgaactagtgcagaagcagacaattatg
cattaccaaccacaaaaatctcagtctttcctgaagatagtagttaccctacctacgatg
gtagctagttgtcgtggcatccttgaaaggggtataacgatggaaggccttggttcaaag
agtttcctgacatatgaaagcaacattctttttgcccttcgttttatgattgattgcaac
attgttggtggcaattggcttgaagttcctgctgggaagtacaggaaagcagctcgcatc
atgtcctattgtcagctggagttggattgcctatactcagatttggtaagccatgctgct
gaaggggaatactctaagatggccccctttcgcatattaagttttgacattgaatgtgct
ggtcgcaaagggcatttcccagaaccaactcatgatcctgttattcagatagctaatttg
ctcacgcttcaaggagaagcccagcctttcgtacggaatgtcatgacccttaaatcatgc
tctcccattgttggagttgatgtaatgtcatttgacacagagagagatattctacttgct
tggagggatttaatacgtgaggcggatcctgatattataatcgggtacaatatctgcaaa
tttgatcttccttatcttattgagagagctgaagttcttaagatagtggagtttccgctg
cttggtcgaatcagaaatagtcgtgtccgtgtccgtgatactactttcaactcaaggcaa
tatggtacgcgtgaaagtaaagatgtaactttggagggaagggtacaattcgacctcctg
caggctatgcaaagggactacaagctgagttcttattcattgaactctgtatctgcacat
tttcttggagaacaaaaagaggacgttcaccattcaattatatctgatcttcaaaatggg
aactcagagacacgaaggcgtctggcagtttattgcttgaaggatgcttatcttccgcag
cgactgttagataaattgatgtacatctacaactatgtagagatggcgagggtcacagga
gtccctatttcatttctgctgtcaaggggacaaagcattaaggtcctctcgcagttgctc
aggaaagcaaaacagagaaaccttgttataccaaacatgaaaggccaaggttctggacaa
gatacctttgaaggtgcaactgttttggaggcaagggctggatattatgagaaacccatt
gcaactttggactttgcttctctgtatccatccatcatgatggcccataacctatgctac
tgcactttggtgccccctgaagatgtccgtaaactcaacttgcctccagaaagcctctac
aaaaccccatctggtgaaatatttgtgaaacaagaattgcaaaagggtatacttcctgaa
atccttgaagaactgttggctgctcgaaaaagagcaaaagcagatttgaaggaagcaaag
gacccatttgaacgcgcagttcttgatggtcgtcagcttgccctaaagataagtgcaaac
tcagtttatggttttactggagctactgttggtcaattaccctgtttagagatttcttct
agtgtgacaagctacggtagacagatgattgagcatacaaagaagcttgttgaagataaa
ttcacaacacttaatggctatgagcataatgcagaggtgatttatggagatactgattct
gtgatggtacagtttggtgtttctactgttgaggacgcaatgaaattgggaagagaagct
gcagactttatcagtgaaacatttattaagcccatcaagctagagtttgagaaaatatat
ttcccatatctactgatcagcaagaagagatatgctggtttgtactggacgaatcctgag
aaatttgacaaaatggatacaaaaggtattgaaacagtaagaagggacaactgtttattg
gtaaagaacctggtaactgagtgccttcataaattactagtggaccgagacattcctggt
gcagttcaatatgtcaagaacaccatatccgatctattaatgaaccgtgtggacttgtca
cttctagttataacgaagggtttgactaaaacaggagaggactatgctgtaaaagctgcc
catgtggagcttgctgagaggatgcggaagagggatgctgctactgcaccaactgttggt
gaccgagttccttatgttataataaaagcagccaaaggggcaaaggcatatgagaagtca
gaagacccaatttatgtactggataataacataccaatagatccccattactaccttgag
aatcaaattagcaaaccactgttgagaatatttgaaccaattctgaagaatgccagcaga
gagctgcttcatggaagtcataccagagctgtttcaatctcaactccttcaaatagcggg
ataatgaaatttgcaaagaaacaattgacttgtcttggatgcaaagcagttataagtggt
cccaatcaaacactttgctcacattgcaagggaagagaagcagagttatactgcaaaacc
gtagcaaatgtttctgatctggagatgctctttgggaagctatggacacagtgccaggag
tgtcaaggctccctgcaccaggacgttctctgcaccagtcgggactgccccattttctat
cggcgaaggaaagcgcagaaggacatggctgaagctagagtgcagcttgatcgttgggac
ttctga
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integrated database retrieval system
