Lolium rigidum (rigid ryegrass): 124681263
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Entry
124681263 CDS
T09103
Name
(RefSeq) uncharacterized protein LOC124681263
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124681263
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lrd04121
]
124681263
Enzymes [BR:
lrd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124681263
Ubiquitin system [BR:
lrd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
124681263
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
F-box-like
F-box
Sina_RING
VinK_C
F54D1_6_C
Motif
Other DBs
NCBI-GeneID:
124681263
NCBI-ProteinID:
XP_047072152
LinkDB
All DBs
Position
Unknown
AA seq
393 aa
AA seq
DB search
MEQHGDLALVARLPEDVLTDVLRRLAATPRWLDISRSVCKAWRAIIDGESLLCTRLPFTG
IFISMAVLPFPELFSRPSAPGRPAVSGKLHFLAAAVKVLPDGGCDRRGNHCIKGHCNGLL
LLNDYVVNPATQRWDRLPERPPNNAKGMVRHSCCNEYLAFDHTVSSHYQFDIQCATGHVI
CMSCHRKLRNKDRCYVCSITGGYQRCIVLEKILESVQIPCSNTMYGCTVKTHYLEGADHD
KSCPCAPCFCPDPSCHFTGSTAELLDHLTHTDNWPATEFEYGQRFDLQIQEGMHVLYTRE
DGTLLLVKFTPVPPFGNAVSIMCVDPHAVAGDRKFRCLVGSNCSTDSWRSDFRTISTNLS
NDLPTEDGSYSLVVPTLSCYSSINVTISKVTVL
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggaacaacacggcgacctggcgctggtggcgcgcctgccggaggacgtgctcaccgac
gtgctgcggcgcctggccgccacgccgcgctggctcgacatctcccgctccgtctgcaaa
gcatggcgagccatcatcgacggcgagagcctcctctgcacacggctccccttcacggga
atcttcatcagcatggcggtgctcccgttccccgagctgttctcccgcccctccgcgccg
ggccggcccgccgtcagcggcaagctccacttcctggccgcggccgtcaaggtcctcccc
gacggaggctgtgaccggcgagggaaccactgcatcaagggccactgcaacgggctactc
ttgctcaacgactacgtggttaaccccgccacgcagcgctgggaccgtcttcccgagcgc
ccgccaaacaatgccaaggggatggttcggcattcctgctgcaacgagtacctcgccttt
gatcacaccgtgtcgtcccactaccagtttgacatacagtgcgccactgggcatgtgatt
tgtatgtcctgccatcgcaagctccggaacaaggacaggtgctacgtgtgctccattact
ggcggctatcaacgctgcatcgtgctcgagaaaatcctggagtctgtccagatcccttgc
tccaataccatgtacggttgcaccgtcaagacacattacctcgagggagcagatcatgac
aagtcgtgcccatgtgcaccgtgcttctgccctgatcctagttgtcactttactggctca
accgcagagctccttgaccatctcacccatacggacaactggccggcaactgagttcgag
tacggacagcgttttgacctgcagatccaggaaggaatgcacgttctctacacaagggag
gatggcaccctgttgctggtaaaattcacgccggtgccgcctttcggcaatgctgtctcc
atcatgtgtgttgatcctcatgccgtggcgggggaccgcaagttcaggtgcctggttggt
tccaactgcagcaccgatagttggcgttcagatttccgtaccataagcaccaatctgtcc
aacgacttaccgacggaggatggcagctactcattggttgtgccgactctttcttgttac
agcagcatcaatgtcactatctcaaaggttacggtgctgtag
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