Lolium rigidum (rigid ryegrass): 124681323
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Entry
124681323 CDS
T09103
Name
(RefSeq) elongator complex protein 2-like
KO
K11374
elongator complex protein 2
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lrd03016
]
124681323
Transfer RNA biogenesis [BR:
lrd03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
124681323
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
WDR55
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_Aladin
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_WDR41
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_NUP159_NUP214
WD40_Gbeta
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_DCAF12
Beta-prop_WDR75_2nd
Beta-prop_Nup120_160
Beta-prop_ELP1_2nd
Motif
Other DBs
NCBI-GeneID:
124681323
NCBI-ProteinID:
XP_047072216
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Position
1:complement(120764347..120768825)
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AA seq
844 aa
AA seq
DB search
MPPAAGDLAGARAGAEAERVFIGAGCNRVVNNVSWGACGLVAFGAQNAVALFSPSRGEIV
TTLPGHKAAVNCTLWLPTKKDVLQVRHRETHYLLSGSSDGAIMAWKIGSGKGEWSHALEL
PAMHKKGVTCLAGRMVSDTVSIFASTSSDGTVVIWEMAVEPTTSGSCKVSCLHSLYVGLK
PMVSLSLAVLPEQEGRLILAMGGLDHKVHIYCGDLSGKFAKACELKGHSDWIRSLDFSLP
VMMGSEKHSLFLVSSSQDKTIRIWKMTSDSISSSSMVQPRKENIGMASYIEGPLFVVGNA
SYQVSLESLLVGHEDWVYSVEWQPPMLLLNAEAHQPMSILSASMDKMMMIWRPEKTTGLW
INSVTVGELSHSALGFYGGHWEPDGKSILAHGYGGFFHMWRDVGLDSENWQPQVVPSGHF
APVSDLTWSRSGEYLLTVSHDQTARIFAPWRSHVNPGDVICWREIARPQIHGHDINCVAF
IQGTGNHRFVCGADEKVSRVFEATLSFLRTLQEATLLKPDNEDFDDVQVLGANMSALGLS
QKPIYTHGGKESPSTTSNDGPDSMETIPDAVPTVFTEPPVEDQLAWHTLWPESHKLYGHG
NELFSICCDHAGKLVASSCKAQSAPVAEIWLWEVGTWKAVGRLQSHNLTVTQMEFSSDNA
FLLSVSRDRHLSIFSIKKTEEGAQHHLVTKHEAHKRIIWACSWNPFGYEFATGSRDKTVK
IWRVQDASSVKLLATLPLFRDSVTALSWTGRDRARNAGIIAVGMDNGLIELWSVSGGRAA
SDVSSDPSALSVACMLRFDPLMCHVSTVHRLRWQKSDSSDEKSSLELASCGADHCTRVFA
VRDS
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgccgccggcggccggggatctcgccggagctcgcgcgggagcggaggcggagagggta
ttcatcggcgccggatgcaaccgcgttgtgaacaacgtctcgtggggcgcctgtggcctc
gtcgccttcggcgcccagaacgccgtcgcccttttctccccttcgagaggagagatcgtg
acgacgctcccggggcacaaggcggcggtgaactgcacgctctggttgccaaccaagaag
gatgtactccaagttcgacacagggagacacactatctgttgtccggaagttctgatggt
gctattatggcatggaagattggttctggaaaaggcgagtggtctcatgctttggaactg
ccagcaatgcacaagaaaggtgtcacctgtcttgctggaaggatggtgtcggatactgtt
tcaattttcgcttccacctcctcagatggcacggtggttatttgggaaatggcagttgag
ccgactactagtggcagctgcaaggtgtcgtgtttgcattctctttatgttggcttaaag
ccaatggtttcactttcattggcggtgttgccggaacaggaaggccgtctgattttagca
atgggagggttagatcataaggtccacatctattgcggggatctgtcaggcaagtttgct
aaagcctgtgaacttaagggccattctgactggattagaagtttagacttctctttacct
gtgatgatgggcagtgaaaagcacagcctttttcttgttagctcgtcccaggacaaaacc
atcaggatatggaaaatgacttcagattctatttcttcttcctccatggtacaaccaagg
aaggagaatattgggatggcctcctatattgaaggtcctctatttgtggtcggtaatgca
agttaccaggtatctttggagtctcttcttgttgggcatgaggattgggtatattcagta
gagtggcagcctcctatgctgttactgaatgctgaagctcatcagccaatgagtatatta
tctgcatctatggacaagatgatgatgatatggaggccagagaaaactactggcctttgg
ataaattccgtgacagttggtgaattaagtcactcggcacttggattttatggtggccat
tgggaacctgatggaaaatctattcttgcgcatggctatggtggattttttcatatgtgg
agagatgttggactggattctgaaaattggcagcctcaggttgtcccatctggtcatttt
gcaccagtgtctgacttaacatggtccagatctggcgaatatttactgacagttagccat
gaccagactgcacgcatatttgctccttggagaagtcatgttaacccaggagatgtgatt
tgttggcgcgaaatcgctcgtccacaaattcatgggcatgatattaattgtgtggcattc
attcagggtacaggaaaccaccggtttgtttgtggtgctgatgaaaaggtctctagagtc
ttcgaagctactttatcgttcctgaggaccctacaggaagcaactttgttgaaacctgac
aacgaggattttgatgatgtgcaagtccttggagcaaatatgtctgctcttgggctttca
cagaaacctatatatacacatggaggaaaggaatccccaagcactacttctaacgatggt
ccagattctatggagacgatccctgatgcagtgccaactgtgtttactgagcctcctgtg
gaggaccaacttgcatggcataccttatggcctgaatctcacaaactttatgggcatgga
aatgaactcttttccatctgctgtgatcatgcagggaagcttgtcgcatcgtcatgcaag
gctcaatcagcaccagttgctgagatctggctctgggaggttggaacatggaaagctgtt
ggccgattgcagtctcacaatctgacagttacacaaatggagttttcctctgacaatgct
tttctgttgagcgtatcaagggatcgccacttgtccatattttcgatcaagaaaacagaa
gaaggagcacagcatcacctggttacaaagcatgaagcacacaaaagaatcatatgggct
tgctcgtggaacccatttgggtacgaatttgcaactggttcaagggacaagactgttaag
atatggcgtgttcaagatgcatcttccgtcaagctgcttgcaacattgcctctgttccgt
gacagtgtgacagcattgtcctggacaggcagggaccgtgctcgtaatgctggtattatt
gctgttggcatggataatggactgatcgagctctggagtgtttcaggtggtcgagctgct
tcagatgttagctcagatccatccgcgctcagcgtcgcatgcatgctccggtttgatcct
ctgatgtgtcatgtgtcaactgtgcaccgtttgcggtggcagaaatctgactcgtctgat
gagaaatcatctcttgagctggcttcttgtggagctgatcactgcacgagggtgtttgcc
gtccgtgatagttga
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integrated database retrieval system