Lolium rigidum (rigid ryegrass): 124681502
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Entry
124681502 CDS
T09103
Name
(RefSeq) THO complex subunit 5A
KO
K13174
THO complex subunit 5
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03013
Nucleocytoplasmic transport
lrd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124681502
09122 Translation
03013 Nucleocytoplasmic transport
124681502
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124681502
03041 Spliceosome [BR:
lrd03041
]
124681502
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
124681502
Spliceosome [BR:
lrd03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
124681502
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
124681502
NCBI-ProteinID:
XP_047072368
LinkDB
All DBs
Position
Unknown
AA seq
788 aa
AA seq
DB search
MAAASAMDVEAPARAPSTTTKPNRRSPHDLLAETRASVEEVAARILAIKKDGAPKSDLNE
LVAQMSLLLITLRQVNREILMEEDRVKGETEAAKAPVDSTTLRLHNLLYEKNHYVKAIRS
CLDFQTKHPGIELVPQEEFHRAAPADIRDKTLAADAAHDLMLKRLNFELVQRKELCERHD
KLEQQKSILMGTIATQKKFLSSLPSHLKSLKKASLPVQQQLGMLHTKKLKQHHAAELLPS
PLYITYTQLLGQKEAFGENIEVEISGSTKDAQTFAQQQAKEANGTLSNDDNNRMDDDAID
DEEDAQRRRSRSRKTSKEANNPALAYQLHPLKVVLHVYDTEVSGTKRRKLITLKFEYLAK
LNVVCVGSENSEGVDSNILCNLFPDDTGLELPHQMAKLYAGEAPNFSEKESRPYKWVQHL
AGIDFLPEAPLSAGESNRAARSADLSSGLALYRQQNRAQTILQRIRSRKVAQMSLTWQLN
YLTKLKWPQIEHQNTPWASRTPLCNLHSWSLTGFFPEPSACSALMVSEPAGSVDSDTERR
SVTNWQETEGIAEDGELPLVVAAEHNPSGSIMSHSEVSPEVRNHSRGLSLITKSATPSKL
SISHSFGRNEDDLDFLMDSDTELEELTCDQETVQGTITIDKSWEDYASREFTMVLSKTLK
NGPKVMLEAKIKISIEYPLRPPLFRLQLISENTVALKWHNDLRAMEAEVNLHILRDLSVS
CEDYMLTHQVMCLAMLFDMHFDEDNEKRKVTSVIDVGLCKPVSGTMLTRSVRGRDRRHTI
YWRGADCS
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcttccgccatggacgtcgaggcgccggcgcgtgcgcccagcaccaccacc
aaaccgaatcgccgctctccccacgacctcctcgccgagacccgcgcctccgtcgaggag
gtcgccgcgcggatcctcgccatcaagaaggacggcgcgcccaagtccgacctcaacgag
ctcgtcgcgcagatgtcgctcctcctcatcacgctccgccaggtgaacagggagatactg
atggaggaggacagggtgaagggcgagacggaggcggccaaggcgcccgtggactccacc
acgctgaggctgcacaacctgctctacgagaagaaccactacgtcaaggccattaggtcg
tgcctcgacttccagaccaagcaccccgggattgagctcgtgccccaggaggagttccac
cgcgccgcgcctgctgacatccgtgacaagacactcgcggctgacgccgcccacgacctc
atgctcaagcgcctcaactttgagctcgtgcagcgtaaagagctatgtgagcggcatgat
aaattggaacaacagaagagcatcttgatggggacaattgcaactcagaagaaattcctt
tcaagcctcccgtcgcatttaaaatcactgaagaaagcatcattgccagtgcagcagcag
ctgggcatgctgcataccaagaaactgaagcagcaccatgcagctgagttgctcccgtct
cctctgtatataacctatacccagttattaggacagaaagaagcatttggagagaatatt
gaagtggagataagtggaagcacaaaggatgctcaaacttttgctcaacagcaagccaag
gaggcaaatggcactttatcaaatgatgataataatcggatggatgatgatgcaattgat
gatgaagaagatgctcagagaagaagatcaaggtccaggaagacttcgaaggaagctaat
aatcctgcgttggcatatcaacttcatccacttaaagttgttctccatgtatatgatact
gaagtttctggaaccaagcgtcgtaagctaataaccctgaagtttgaatatttggcaaag
ttgaatgttgtctgtgttggatccgaaaactcggagggggtggacagcaatattctgtgc
aacctgtttccagatgacactggtttagagctgcctcatcagatggctaagctttacgct
ggggaggctccaaattttagtgaaaaggagtcacgtccatacaagtgggtacagcatcta
gctggtatagatttcctgccagaagctcctttatctgccggggaatctaacagagcagcg
agaagtgctgatttgtcatctgggcttgcactataccgccagcagaatcgtgcacagact
attttgcagagaattcgctctcggaaagttgcccaaatgtctctcacgtggcaacttaat
tatttaactaagctgaagtggcctcaaatagaacaccagaatacaccgtgggcatcacgc
accccattgtgtaatctgcatagttggtcattgacagggttttttcctgagccatcggct
tgttctgctttaatggtgagtgagcctgcaggaagtgttgacagtgatacggagagaaga
tctgtgacaaactggcaagaaactgagggtatcgcagaggatggggaacttccgcttgtg
gttgctgctgaacataacccaagtggttccataatgtcgcactcagaggtgtcacctgaa
gttcgaaaccattctagaggcttatcccttataacaaagagcgccacgccatctaagcta
agcatctcacacagttttgggagaaatgaggatgatcttgatttcttaatggacagtgat
actgagttggaggaactgacatgtgaccaagaaactgtacaaggtactataactatcgac
aaatcctgggaggactatgcttccagggagttcacgatggttttgagtaaaactttgaag
aatggtccaaaagtcatgctggaggccaagattaaaattagcatagaatatcctcttagg
ccaccccttttcagattacagctgatttctgaaaacaccgtggctttaaaatggcacaat
gatctccgtgcaatggaagctgaggtgaatcttcacatcctccgagacttgtctgtgtca
tgtgaggactacatgttaacccaccaagttatgtgccttgctatgttatttgatatgcac
tttgacgaggataacgagaaaagaaaagtgacttcagtgattgatgttgggctttgcaaa
cccgtaagtggaactatgctcactagatcagtcaggggaagagaccgcagacacaccatc
tactggcgaggtgctgattgctcttag
DBGET
integrated database retrieval system