Lolium rigidum (rigid ryegrass): 124681557
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Entry
124681557 CDS
T09103
Name
(RefSeq) prolycopene isomerase, chloroplastic
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd00906
Carotenoid biosynthesis
lrd01100
Metabolic pathways
lrd01110
Biosynthesis of secondary metabolites
Module
lrd_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
124681557
Enzymes [BR:
lrd01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
124681557
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Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
FAD_oxidored
HI0933_like
GIDA
Pyr_redox_2
Thi4
FAD_binding_3
GMC_oxred_N
Motif
Other DBs
NCBI-GeneID:
124681557
NCBI-ProteinID:
XP_047072410
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All DBs
Position
Unknown
AA seq
591 aa
AA seq
DB search
MPLLLSPLAARTLHAPLLPASATAAPQASRLRALGSQPRGCSRSRLAVLSEKQAAAVVTE
KSLAGEGGDEGGRYDAIVVGSGIGGMVAATQLAAKGARVLVLEKYIIPGGSSGYYRRDGF
TFDVGSSVMFGFSDKGNLNLITRALEAVGCKMEVIADPSTVHFHLPGDLSVLVHREYNDF
VKELVSKFPHEKQGILKFYGICWKIFNSLNSLELKSLEEPLYLFGQFFKKPLECLTLAYY
LPQNAGDIARKFIKDQQLLSFIDAECFIVSTVNALKTPMINASMVLCDRHYGGINYPVGG
VGGIAVALANGLVEKGSEIRYKANVTNVILEKGKAVGVKLSNGKEFFAKTVISNATRWDT
FGKLVKVEELPEEEKNFQKNYVKAPSFLSIHLGVKASVLPAGTDCHHFVLEDDWSNLEKP
YGSIFLSIPTVLDPSLAPEGHHILHIFTTAGIEDWEGLPRKDYEQKKELVANEIIQRLEK
KLFPGLQDSIVLKEVGSPKTHRRFLARNDGTYGPMPRDKPKGLLAMPFNTTSIDGLYCVG
DSCFPGQGVIAVAFSGVMCAHRVAADIDLEQRSPILDTGLLGVLRWFRTLA
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgccgctcctcctctcgcccctcgccgcgaggaccctccacgccccgctcctccccgcc
tctgccaccgccgcaccgcaggcctctcgcctccgcgctctcggtagtcaaccccgcgga
tgcagcaggtcaagactggcggtgctgtcggagaagcaagcggcggcggttgtgacggag
aagtcgctagcgggggaggggggcgatgaagggggacgatacgacgcgattgtggtcggg
tcggggatcggcgggatggtggcggccacgcagctggcggccaaaggggcgcgggtgctg
gtgctcgagaagtacatcatcccggggggcagctccggctactaccgccgcgacggcttc
accttcgacgtcggctcctccgtcatgttcggattctccgacaagggaaacttaaatttg
ataacccgagcactagaagcagttggatgtaagatggaggtcatagcagacccttctacg
gttcatttccatctacctggtgatctttccgttcttgtgcatagggagtataacgacttc
gtcaaagagctggttagcaaattccctcatgaaaaacaaggaatcctgaaattctatggc
atatgttggaagatcttcaattcattaaattctttggaactaaagtccctcgaggaacct
ctataccttttcgggcaattttttaagaagcctctcgagtgcttgactctcgcatattat
ctgccacagaatgctggggatattgctcgcaagttcataaaagatcagcagctgctatcc
ttcatcgatgctgagtgttttattgtgagcacagtgaatgccttgaaaacacccatgatc
aatgccagcatggtcttgtgcgataggcactatggaggaattaattatccagtcggcggt
gtgggtggtattgctgtggccttggcaaatggccttgttgaaaaaggcagtgaaatacgt
tacaaggcgaatgtgaccaatgttattcttgaaaagggaaaagctgttggagtcaagtta
tcaaatgggaaggagttctttgctaaaacagtgatatcaaatgccacaagatgggacaca
tttgggaaactcgttaaagttgaagagcttccagaagaggagaagaactttcagaagaat
tatgttaaggcgccatcttttctatccattcatctgggtgtcaaagcgtcagtattacct
gctggtactgactgccaccattttgtactggaggatgactggtctaacttggagaagcct
tatggaagcatatttttaagtatccctacagttcttgatccatccttggcaccagaagga
catcacatacttcatatatttacgactgcaggcatagaagattgggagggtctgcctagg
aaggattatgagcagaaaaaggagcttgtggcaaatgagatcatacaaagacttgaaaag
aagttgtttcctggtcttcaagactcaatagtcctcaaggaggtaggatcaccaaaaact
caccgaagatttcttgcccgaaatgatggtacatatggacccatgccacgcgataaaccc
aagggattgctggcaatgcctttcaatactacttcaatagatggcctttactgcgttggt
gacagttgttttcctgggcaaggtgtgattgctgtggcattttcaggggtaatgtgtgct
catcgagttgcagcagacatagatcttgaacaaaggtctcctatcctagacactggcctt
cttggtgtcctcagatggtttagaacactcgcatag
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