Lolium rigidum (rigid ryegrass): 124681889
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Entry
124681889 CDS
T09103
Name
(RefSeq) exosome complex component RRP41 homolog
KO
K11600
exosome complex component RRP41
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124681889
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124681889
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
124681889
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
124681889
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
124681889
NCBI-ProteinID:
XP_047072623
LinkDB
All DBs
Position
Unknown
AA seq
242 aa
AA seq
DB search
MEHVNPLTGFRVDGRRPNEMRQLRGEVGVVSRADGSALFEMGNTRVIAAVYGPREIQNRS
QQVNLKEALVRCEYRMAEFSTGDRRRKPKGDRRSTEISLVIRQTMEASILTHLMPHSQID
IFVQVLQADGGTRSACINAATLALADAGIPMKDIVTSCSAGYLCSTPLLDLNYIEDSAGG
PDVTVGILAKMDKVTLLQMDAKLPMDTFETVMELATEGCKAIATYIREVLLENTKQLECQ
RG
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atggagcacgtgaaccctctcaccggcttccgagtcgacgggcgccgccccaacgagatg
cggcagctcaggggcgaggtcggcgtcgtctccagggccgacgggtcggcgctgttcgag
atgggcaacacccgggtcatcgccgccgtctacggccctcgagagatccagaacagaagt
cagcaagtaaacttgaaagaggccttggtgcgttgtgaatatcgaatggcagaattcagc
actggggatcgaaggagaaagccaaaaggtgacaggcgatcaacagaaatttcacttgtt
attagacaaacaatggaggcaagcatattaacacatttgatgccacactcacagattgat
atttttgtccaagttcttcaagctgatggtggaacaaggtcagcatgcatcaatgctgca
acactagcacttgcagatgctgggattccaatgaaagacattgttacgtcttgcagtgct
ggatatctgtgttctactcctttgcttgatctgaattatatagaagacagtgctggaggt
cctgatgtcactgttggcattcttgcaaagatggacaaagtgactcttctgcagatggat
gcaaagttaccgatggacacatttgaaactgtaatggaacttgcaactgaagggtgcaaa
gctatcgcaacctacatacgagaggtgctgttggagaacacgaaacagctggagtgtcag
cgtggttag
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integrated database retrieval system
