Lolium rigidum (rigid ryegrass): 124682368
Help
Entry
124682368 CDS
T09103
Name
(RefSeq) ATP-dependent DNA helicase 2 subunit KU80 isoform X1
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
124682368
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lrd03400
]
124682368
DNA repair and recombination proteins [BR:
lrd03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
124682368
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_PK_bind
Ku_N
Ku_C
VWA
Motif
Other DBs
NCBI-GeneID:
124682368
NCBI-ProteinID:
XP_047073015
LinkDB
All DBs
Position
Unknown
AA seq
708 aa
AA seq
DB search
MARNKEGLVLLLDVGPSMHRALQEVENVCSTLVRKKLVYNRSDEVGIVLFGTKETCNDLA
KELGGYKHVVVKHDIKVVDEETKDALQNLPRGTVPGDFLDAIVVGLDMLIKRFGNTKGKQ
RLCLITDAQHPLRDPPQGTKVDQVDTIADQMKKHDIKMDCIVFRESGVHHNSVMDENDQL
LYHFRDRSVAKVVQVDTPTSLLGALKTRNVLPVTIFRGDLEVSSNFKIKVWVYKKTSEEK
FPTLKKYSDKAPPSDKFASHEVKVDYEYKSILEPDTVVPPDQRIKGYLYGPQVVPISSAE
WEAVKFKPEKGVKLLGFAHRSSIPRHYFMKDVNSFVPEPGNTKAIVAASAIARAMQETDK
VAILRCVWRQGQGSVAFGVLTPNISSVKNVPDSFYFNILPFAEDVREFQFRSFSRLPPSL
QPTEEQQEATDNLVKMLDLAPPGREEILRPDFTPNPMLERFYNYLDLKSKEPDANPPPLD
TCLKRITRPDPDVIDYQAPLIQNLGKSFELKDNPKRKKARTQERLAYAGLDDQPKKPEDP
SAEKAKRIDSQAKKSEDPDAAKMARALEAMFPSTEKAGKIGDLNPVQDFEAMLAERSSSA
WVLKAIEEMKKYTTDLIQNSPKGDYYQKALECFVALRKACIIEQEPNEFNQFVTELYENL
KTVDDVVKFFQLLASKNVLLISKAEASDSDVTEEMARSFFVKTEASSQ
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcaacaaggaagggctggtcctgctgctggacgtcggcccgtcgatgcaccgg
gcgcttcaggaggtcgagaacgtctgctccaccctcgtgcgcaagaagctggtttataac
aggagcgatgaggttggcatcgttcttttcggaactaaagaaacgtgcaatgaccttgca
aaggaacttgggggctataagcatgtggtggttaagcatgatatcaaagttgttgacgaa
gaaacaaaagacgcacttcaaaatcttccaagaggaactgtccctggcgattttctggat
gctattgttgttggtttggatatgctgataaagagattcggaaataccaaaggaaagcaa
cgtctgtgtctaatcactgatgcacaacatccattaagagatccgccccaaggaaccaaa
gtagatcaggtggacactattgcagaccagatgaaaaaacatgatattaagatggattgc
attgttttcagagaatctggcgttcatcacaattctgtaatggatgaaaatgaccagtta
ttatatcacttcagagataggtcagtggcaaaggtagttcaggttgacaccccaacatca
ctcttaggtgctctcaagactagaaatgtactcccagttactatcttcaggggagacctt
gaagtgagctctaatttcaaaatcaaggtgtgggtctataagaaaacatctgaggagaaa
ttccccactttgaagaagtattctgataaggctcctccaagcgataaatttgcctcacat
gaagtcaaagtggattatgagtacaaaagcattctagaaccagacacagttgttccacca
gatcaaagaatcaagggctatctttatggtcctcaagttgttcctatatcatcggctgaa
tgggaggcagtgaagttcaaaccagagaaaggtgtgaagcttctaggtttcgcacacaga
tccagcattccacggcactattttatgaaagacgtgaattcctttgtacctgaaccggga
aacacaaaagcaattgttgcagcttctgccatagctagggcaatgcaagaaacagacaag
gttgcaattctgcgatgtgtttggaggcaaggtcaagggagtgttgcttttggtgtattg
acacccaacatctcatcagtgaaaaatgttccagattccttttacttcaatatacttcca
tttgctgaggatgtcagagagttccagtttcgctccttcagcagactgccaccatcatta
cagcctacggaagaacagcaggaagcgacagataacctggtgaagatgttagaccttgca
ccacctgggagggaagagatcctcagaccagatttcactccaaatcccatgttggagagg
ttctacaattaccttgatctgaagtcaaaagaaccagatgcaaatcccccaccacttgat
acatgtctgaagaggataactaggccagatcctgatgtcattgattatcaagcaccatta
atccaaaatttaggcaaatcatttgagctgaaggataaccccaagagaaagaaagcccgg
acacaggagagattggcttatgctggtctggacgatcaacctaagaagccagaagatcct
tctgcagagaaggctaagaggatagacagtcaagctaaaaagtcagaagaccctgatgca
gcaaagatggctagggcgctagaagctatgtttccttcaacagagaaggctgggaagatc
ggagatctaaaccctgttcaagatttcgaagctatgctggcagagagatctagctcggca
tgggttctgaaggcaattgaagagatgaagaaatacacaacggatttgatacaaaattcc
cccaaaggagactattaccagaaggcgctggagtgtttcgttgctctgcggaaggcctgc
ataatcgaacaggagccgaacgaattcaaccaattcgtgacagagctctacgagaatctg
aagacggtggatgatgttgtcaagttcttccagcttcttgcgtcgaagaatgttttgctt
ataagcaaagcagaagcatctgacagcgatgtgaccgaagagatggcgaggagcttcttt
gtgaaaacagaagcatcctctcagtag
DBGET
integrated database retrieval system
