Lolium rigidum (rigid ryegrass): 124682649
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Entry
124682649 CDS
T09103
Name
(RefSeq) polypyrimidine tract-binding protein homolog 1-like isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lrd03041
]
124682649
Spliceosome [BR:
lrd03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
124682649
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_8
DcuA_DcuB
Motif
Other DBs
NCBI-GeneID:
124682649
NCBI-ProteinID:
XP_047073254
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Position
1:146342015..146346601
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AA seq
456 aa
AA seq
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MPSGSTQFRYTQTPSKVLHLRNMPWESTEEELVDLCKPFGRVVNTMCNVGANRNQAFVEF
ADQNQAISMVSYYASSSEPAQVRGKTVYIQYSNRQEITNNKGTGDSSGNVLLVTFEGVQP
NDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQYTDAPTALEAKNSLDGRSIPRYLLP
EHVSICHLRITFSAHKDLNIKFQSHRSRDYTNPYLPVNPTAIEGIAQPTLGSDGKIKEPE
SNVLLASIENMQYAVGVDVLHTVFSSFGTVQKIAMFEKNGGMQALIQYPDITTAGVAKQA
LEGHCIYDGGYCKLHLSYSRHTDLNVKANDERSRDYTVSNPSAQVQAPGLSTPGTAWQST
MPAASSFYGSSAGATPVGQVRAWNPNMQQGAFASASTSYPTQSLMAHSAPHYPVIGSSSG
APPMLYQASQQMAQYGAPRAAPPHAPLAGQPLYFPK
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcgggatcgacgcagttccggtacacgcagacgccgtccaaggtgctgcacctg
cggaacatgccgtgggagagcaccgaggaggagctcgtcgacctctgcaagcccttcggc
agggtcgtcaacaccatgtgtaacgtcggcgccaaccgcaaccaggccttcgtcgagttc
gctgatcaaaaccaggcaatttcaatggtttcatattatgcttcatcttcagaacctgcc
caagttcgtggtaaaactgtatatatccagtattcaaataggcaagaaataacaaataat
aaaggcactggggattcttctggcaatgtcctgcttgtcacctttgaaggtgtccagcct
aatgatgttagcatagatgttattcatttggtattttctgcttttgggtttgttcacaag
atagcaacatttgagaaagctgctggtttccaggcgcttatccaatatactgatgctcca
actgctctagaagcaaaaaattcgttggatggaagaagcatcccgagatatctactgccc
gaacatgtcagcatttgtcatctgcgcataacattttctgcacacaaagatttgaatatt
aaattccagtcacatcgcagcagggattacacaaatccttatcttcctgttaatccaact
gcaattgaggggattgcacagcccacattaggctctgatgggaagattaaggagcctgag
agcaatgtacttttagcatcaattgagaatatgcagtatgctgtgggagtggatgttctg
cacactgtgttttcttcttttggtactgtccaaaagattgcaatgttcgagaagaatggt
ggaatgcaggctctgattcagtatccagatataacaacagcaggagttgctaaacaagcc
ttggaggggcattgcatatatgatggtggttactgtaagcttcatctgtcatactctcgt
catactgatctcaatgtaaaggcaaatgatgagagaagccgagactacactgtctcaaat
ccgagtgcccaggtgcaagccccaggactaagcaccccaggaacagcatggcaaagcacc
atgccagctgcttcctccttttatggaagctcagcaggagcgacccctgttggacaagtg
cgagcttggaatcctaacatgcagcaaggggcatttgcatctgcatcaacctcgtaccca
acacaatctttgatggcacactcagctccacactatcctgtaatcggatccagttctggt
gctccgccaatgttgtaccaagcatcacagcagatggcccagtatggcgcaccccgtgct
gctccgcctcatgcacccttggctggccagccgttgtacttcccgaaataa
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