Lolium rigidum (rigid ryegrass): 124682783
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Entry
124682783 CDS
T09103
Name
(RefSeq) WD repeat-containing protein 76-like
KO
K24755
WD repeat-containing protein 76
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lrd04121
]
124682783
03036 Chromosome and associated proteins [BR:
lrd03036
]
124682783
03400 DNA repair and recombination proteins [BR:
lrd03400
]
124682783
Ubiquitin system [BR:
lrd04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
124682783
Chromosome and associated proteins [BR:
lrd03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
124682783
DNA repair and recombination proteins [BR:
lrd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
124682783
DSBR (double strand breaks repair)
Other DSBR factors
Others
124682783
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EML
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_LRRK2
PROPPIN
Beta-prop_HPS5
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
124682783
NCBI-ProteinID:
XP_047073356
LinkDB
All DBs
Position
1:180445919..180451782
Genome browser
AA seq
458 aa
AA seq
DB search
MASPPDGDLTEYERLRAENIRRNDVILASLRRKADELSAAIKSSSSAKRGRTSGQPRKKP
TTPTGPAVLRRSLRLSQLPPSHSPDAEPIPGPPPKPRSTSFSSSLASSILDAVSLSPGAA
KVCADYFDAGKELVLTPANVRRVVPDRILGVRVLPLVDRTVVVAGNKLGNIGFWDADGMV
EDEGDDDADGLFEYLPHRGPVPAIVAHPGVPHKIYSCSYEGEICLMDLEKENFNMIHLCD
YPVYSLCQAPDNASCLYFGDGNGELKLFDERMGKVSATWDSHDNSINSIDFHPEKKHMVA
TSSTDRTARIWDLRRLKKKKDDCLKVLKHSRSVQSAYFSPSGRMLATTSLEDTVRVFHCD
DFDTSHTIKHNNQTGRWLSTFKAIWGWNDVDLFIGNMKRAIDVISVSSSGTGLSASNSAC
LESEDMTAIPCRFSAHPYKVGHLACASSGGKVFLWTRA
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgcctccggacggtgatctcaccgagtacgagcgcctccgcgcggagaacatc
cgccgcaacgacgtcatcctcgcctccctccgccgcaaggccgacgagctctcagccgcc
atcaagtcctcctcctccgcgaaacgaggacgtaccagtggtcagccacgcaagaagccc
accaccccaacgggccccgcggtgctccgccgctccctccgactctctcaactccctccc
tcccactcccccgacgccgagcccatccctggcccacctccgaagccccgcagcaccagc
ttctcctcttcgctcgcgtcctccatcctcgacgccgtctcgctttcacccggggctgcc
aaggtttgtgccgattatttcgatgccggcaaggagctcgtgctgacgcctgccaacgtg
aggagggtcgtccccgacaggatactgggggtgcgggtcctgccgctggtcgaccgcacc
gtggtggtggcggggaacaagttggggaatattggcttctgggacgcagacggcatggtg
gaggatgagggcgacgacgatgcagatgggctgttcgagtatttgccccacaggggccct
gtgccagcaatcgtggcacacccgggcgttccgcacaagatctacagctgcagctatgag
ggtgaaatttgtctcatggaccttgagaaggagaacttcaatatgatccacttgtgtgat
tatcctgtttattcactttgtcaagcaccggataatgctagctgcctatattttggtgat
ggaaatggtgaactgaaactctttgatgagcggatgggtaaggtatcagccacgtgggat
tcacacgacaattcaatcaactcaatagattttcatccagagaaaaaacatatggttgcc
acaagttcaacagatcgaacagcacgtatatgggatcttagaaggctgaaaaagaagaaa
gacgattgtttgaaggttctcaaacatagtaggtctgttcagtcagcttatttctcacct
agtggccgcatgctagcaacaacaagccttgaagatactgtccgggtctttcactgtgac
gactttgatacctcacacactatcaagcataataaccagacaggaagatggctttctaca
ttcaaggcaatctggggttggaacgatgtcgacctttttattgggaacatgaagagggca
atagatgtcatctcagttagtagcagcggcactggcctctcagcttcaaacagtgcgtgc
cttgagagtgaagacatgacagccattccttgcaggttctctgcacatccgtataaagtt
ggccatcttgcttgtgcaagctctgggggtaaggtattcctttggacccgagcttga
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