Lolium rigidum (rigid ryegrass): 124682945
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Entry
124682945 CDS
T09103
Name
(RefSeq) THO complex subunit 7B-like
KO
K13176
THO complex subunit 7
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03013
Nucleocytoplasmic transport
lrd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124682945
09122 Translation
03013 Nucleocytoplasmic transport
124682945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124682945
03041 Spliceosome [BR:
lrd03041
]
124682945
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
124682945
Spliceosome [BR:
lrd03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
124682945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THOC7
YwqH-like
ArsR
MG280
APG6_N
Motif
Other DBs
NCBI-GeneID:
124682945
NCBI-ProteinID:
XP_047073497
LinkDB
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Position
1:197170824..197174904
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AA seq
242 aa
AA seq
DB search
MLTKGRRVAGRGEDMSAHYAFGPHEDDAIIKHRLLTRTTTTRGEPPLKKLQKKFMSFATE
VEKDADNTSDCEKLYKAFLQEINTFELPLLKSKAVVDANLREKESFNELQVEIQRQILQA
QTDIEDLKKQLEQSKIERQHKEECEAIRKLISLQPPRSETEKLIADLEKEISNLEAESAA
CTRTLELRKKQFALLLHVVEELQISIEDEQRSIADELRAATEEPKMSIEEGSGGASDAMA
VD
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgcttaccaaagggaggagagttgctggaaggggtgaagacatgtctgcacattatgca
tttgggccacatgaggatgatgcgattattaaacaccggcttctgaccaggactacaact
accaggggcgaaccacccctaaagaagctccaaaagaagttcatgtcctttgctaccgag
gttgagaaggatgcagacaatacaagtgactgtgagaagctgtacaaggcctttctacag
gaaattaacacgtttgagctgcctcttcttaaaagcaaggctgtagttgatgcaaacctt
agggagaaggagagcttcaatgagctgcaggttgagatccagcggcaaatcttgcaagct
cagactgatattgaggatcttaagaagcaacttgaacaaagcaagatcgagaggcagcac
aaagaggagtgcgaagcgataagaaaactgatttcattgcagcctccgcggtcagaaacc
gagaaactcatcgctgatcttgagaaggagatatctaatttggaggctgagagtgcagca
tgtacaaggacattagagcttaggaagaagcagtttgctcttcttctgcatgtggtggag
gaattgcaaatctcaatcgaagatgagcaaaggagcatagcagatgagctgagagccgcc
actgaagaaccaaagatgagcatagaggagggcagcggcggtgcttcagatgcaatggct
gtagactga
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