KEGG   Lolium rigidum (rigid ryegrass): 124682945
Entry
124682945         CDS       T09103                                 
Name
(RefSeq) THO complex subunit 7B-like
  KO
K13176  THO complex subunit 7
Organism
lrd  Lolium rigidum (rigid ryegrass)
Pathway
lrd03013  Nucleocytoplasmic transport
lrd03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lrd00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    124682945
  09122 Translation
   03013 Nucleocytoplasmic transport
    124682945
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lrd03019]
    124682945
   03041 Spliceosome [BR:lrd03041]
    124682945
Messenger RNA biogenesis [BR:lrd03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     124682945
Spliceosome [BR:lrd03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    124682945
SSDB
Motif
Pfam: THOC7 YwqH-like ArsR MG280 APG6_N
Other DBs
NCBI-GeneID: 124682945
NCBI-ProteinID: XP_047073497
LinkDB
Position
1:197170824..197174904
AA seq 242 aa
MLTKGRRVAGRGEDMSAHYAFGPHEDDAIIKHRLLTRTTTTRGEPPLKKLQKKFMSFATE
VEKDADNTSDCEKLYKAFLQEINTFELPLLKSKAVVDANLREKESFNELQVEIQRQILQA
QTDIEDLKKQLEQSKIERQHKEECEAIRKLISLQPPRSETEKLIADLEKEISNLEAESAA
CTRTLELRKKQFALLLHVVEELQISIEDEQRSIADELRAATEEPKMSIEEGSGGASDAMA
VD
NT seq 729 nt   +upstreamnt  +downstreamnt
atgcttaccaaagggaggagagttgctggaaggggtgaagacatgtctgcacattatgca
tttgggccacatgaggatgatgcgattattaaacaccggcttctgaccaggactacaact
accaggggcgaaccacccctaaagaagctccaaaagaagttcatgtcctttgctaccgag
gttgagaaggatgcagacaatacaagtgactgtgagaagctgtacaaggcctttctacag
gaaattaacacgtttgagctgcctcttcttaaaagcaaggctgtagttgatgcaaacctt
agggagaaggagagcttcaatgagctgcaggttgagatccagcggcaaatcttgcaagct
cagactgatattgaggatcttaagaagcaacttgaacaaagcaagatcgagaggcagcac
aaagaggagtgcgaagcgataagaaaactgatttcattgcagcctccgcggtcagaaacc
gagaaactcatcgctgatcttgagaaggagatatctaatttggaggctgagagtgcagca
tgtacaaggacattagagcttaggaagaagcagtttgctcttcttctgcatgtggtggag
gaattgcaaatctcaatcgaagatgagcaaaggagcatagcagatgagctgagagccgcc
actgaagaaccaaagatgagcatagaggagggcagcggcggtgcttcagatgcaatggct
gtagactga

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