KEGG   Lolium rigidum (rigid ryegrass): 124682981
Entry
124682981         CDS       T09103                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2-like
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
lrd  Lolium rigidum (rigid ryegrass)
Pathway
lrd03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:lrd00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    124682981
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lrd03021]
    124682981
Enzymes [BR:lrd01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     124682981
Transcription machinery [BR:lrd03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     124682981
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5
Other DBs
NCBI-GeneID: 124682981
NCBI-ProteinID: XP_047073529
LinkDB
Position
1:complement(201223756..201232028)
AA seq 1230 aa
MEEPQTDDQPLPNGPDTELDVTDFMVLGSDVEVKFHVKEDAKGGQQPSPDSDADSGQCPM
DVDLKVIPPVEDEGEIKSSTVPRAQVPIDMSVESLEKFCKEAARSFFSERGLISHQINSY
NDFVSHGLQELFDSLGETTVEPDYDPSKKMGAWRHATIKFGRVKLGKPEFWADNSDLDEQ
ALKLKPVHARLQNMTYSSKINVEMTVQVYSLGPSEKSKTGKDPYIQKKVILPPETKWVTI
GRLPVMVKSKLCWLHELKETECQYDSGGYFLIKGTEKAFIAEEQKCLSRIWVSNQRGWDA
CYLSQLKRERIYVKLVDSKEGDDFRKVINLSFLGATIPIWIMFFALGVSSDKEAFEMIDI
QDCDSSLVNIISATIKESREQCKGFRGGDRARQLVDKFIRKTKFPPEDSFDGYVAKYLFP
GVGDNRCKALFLGYMMKCLLMAYSGQRKCDNKDDFRNKRLDLACQLLRRELWVHLRHAER
RMVKIMQRHLCGEGDLQVLDHYIDATIVTNGLNRAFSTGSWRHPYLYARCSGIVATLRRA
NPLQMMSDLRKTRQLSSYWGGAGDARYPNPSYWGKLCFMSTPDGEKCGFVKNLAVSAVVS
SVMRESLLDLFVSCGMKKLDEVLLQELGGKDKIFLNGNLVGMSAYPGEFVTHLRNMRRSK
QIDPQVEIKRDKQHKEVRVFSDAGRLLRPLLIVENLKNITKPKGGSYSFGELMDQNIIEL
IGVEEEEDIRCACGVRDLLSGDKKEGLLYYTHCELDPSFVLGLSCGIIPFANHNAARRVL
MQAEKLSQQAIGYSSTNSQYRADTLFHQLYYPQRPLFKTVVSDCLGEKNHNRPEFFNGQN
AIVSVSIHQGFNQEDSLVLNRASLERGMFRTFHFKSYKAQIENKEVTRRLKHREKVEFGK
TQSKKGRVDSLDIDGLPYVGASLQSGDIVIGKVSESGEDHSMKLMHTEKGMVEKVVLSAN
DDGKNSAVVTLRQARSPCVGDKFASMHGQKGVVGLLDSQENFPFTCQGIVPDIVINPHGF
PTRQTPGQLLEAALGKGIALGGMTKYATPFTTPSVDVITEQLHKAGFSRWGGESVLNGHN
GERMQSLVFIGPTFYQRLTHMSEDKVKFRNTGPVHPLTRQPVVDKKRFGGVKFGEMERDC
LLAHGATANLHERLFTLSDLSQLHICQGCERVANVIMRPVEGGKTVRGPYCGFCKSAENI
LQIKVPYGAKLLYQELFSMGICLKFETEAS
NT seq 3693 nt   +upstreamnt  +downstreamnt
atggaggagccgcaaacggacgaccagccgttaccaaatggaccagatactgagcttgat
gtcacagacttcatggttttgggttccgatgtagaagtgaaatttcatgtaaaagaggat
gcaaaaggtgggcaacagccatctcctgattctgatgccgattcagggcagtgccctatg
gatgtggatttgaaagtaataccacctgtggaagatgaaggggaaatcaagtcttctacg
gtcccacgcgcgcaagtaccaattgacatgagtgttgaaagcctggagaagttttgtaaa
gaagcagcaagatcattcttcagtgaaagaggactaatcagtcatcagataaattcctat
aatgattttgtctcccatggactccaagagctctttgattctctaggggaaactactgtt
gagcctgattatgatccttcaaagaagatgggtgcctggagacatgcaaccatcaagttt
ggcagagtgaagcttgggaagccagagttttgggctgataatagtgatctcgatgagcag
gcactcaaactgaagcctgtacatgctcgcctccagaacatgacatattcttctaaaatc
aatgtagaaatgactgttcaggtttattcactcgggccaagcgaaaaatcgaaaaccgga
aaggatccgtatatccagaagaaagttatattacctccagaaactaaatgggtcaccatt
ggcaggttgcctgtcatggtgaagtcaaaattgtgctggctgcatgaacttaaggaaact
gagtgccagtatgattctggtggatattttctaatcaagggaacggaaaaggcatttatt
gccgaagaacagaaatgcttatccaggatttgggtgagtaaccaacggggttgggatgct
tgttacttgtctcaactcaaacgagaaaggatctatgttaagcttgttgattctaaagag
ggtgacgatttccgcaaagtgatcaacctgtccttcttgggtgcgactataccaatatgg
ataatgttttttgcactaggtgtatcatcagacaaggaggcttttgagatgattgacata
caagattgtgattcttctttggtcaacataatatcagcaaccattaaagaatcccgtgaa
caatgcaagggcttccgcggaggagatagagcccgccaacttgttgacaagttcatcaga
aaaacaaagtttccgccagaagattcatttgatgggtatgttgccaagtatctgtttcct
ggtgtgggcgacaataggtgcaaggcacttttcttgggttacatgatgaaatgtctgcta
atggcctactctggtcaacgcaaatgtgataacaaggatgatttccgtaacaagaggcta
gatctagcatgtcagctgcttcgtagagaactttgggtacatcttaggcatgcagagaga
cgcatggttaagataatgcagagacatttgtgtggtgaaggtgacttacaagttctcgat
cattatattgatgccacgattgttaccaatggtctgaaccgtgccttctccactggttct
tggcgccatccatatttatatgcaaggtgctcagggattgttgcaacccttaggagagca
aatccgcttcaaatgatgtctgacttgaggaagactagacaattatcttcatactgggga
ggagctggagatgctagatatccgaatccctcctattggggaaagctgtgtttcatgtcc
actccggatggtgaaaaatgtggttttgtgaagaatctggctgttagtgctgtggttagc
tctgtgatgagggagtctttgcttgacttatttgtctcttgtggaatgaagaaactggat
gaagttcttttacaagagcttggtggtaaagacaagattttcttgaatggaaatttggtt
ggtatgagtgcatacccaggcgagtttgttacacatctaaggaatatgagacgtagcaag
caaatcgatccacaggtggaaatcaaaagggacaagcaacacaaagaagttcgtgtcttt
tctgatgcagggagacttctaagaccacttcttatagttgagaatcttaaaaatatcact
aaaccgaaaggtggatcatactcatttggggaactgatggaccaaaatataattgagctg
attggtgttgaagaggaggaggatatccgatgtgcctgtggagttagggatctcttgtct
ggggacaaaaaagagggtcttttgtactacactcattgtgaacttgacccttccttcgtg
ctagggttgagttgtggtatcattccctttgccaaccacaatgctgctcggagggttttg
atgcaagctgaaaaactatcacaacaggctattggctactcctctacaaattctcagtat
agggctgataccctttttcatcaattgtactatccacagagacccctgtttaaaactgta
gtgtctgactgtcttggtgagaaaaaccataatagaccagagtttttcaatggccaaaat
gcaatagtttcagtcagtattcatcagggatttaaccaagaagactccctggtattgaat
agggcttctttagagcgtggcatgttccggacatttcatttcaagagctacaaagcacag
atagaaaacaaagaggtgaccagacgactcaaacacagggaaaaagttgaatttggaaaa
acccaaagcaagaaaggacgtgttgacagtctggatattgatggcttaccatatgttgga
gcaagtcttcagagtggcgacattgtcattgggaaagtctcggaatctggtgaagatcat
agtatgaagcttatgcatactgaaaaagggatggtggagaaggttgttctttcagctaat
gatgatgggaagaactctgcagttgttactctaagacaggctcgctcaccttgcgttgga
gacaagttcgccagtatgcatggccagaaaggagttgttggtctcttggattctcaggag
aacttcccgtttacttgccaaggaatagttccagatattgtgataaatccacacggattt
ccaactcgtcagactcctggtcagctgcttgaggctgcgttgggcaagggaattgccctt
ggtgggatgaccaaatacgcaacaccatttaccactccatctgtcgacgtgatcacggag
caattgcacaaggctgggttttcaaggtggggaggagagagtgttctgaatggtcacaat
ggcgaaaggatgcagtccttggtcttcattggcccaaccttctaccagaggctgacccac
atgtctgaggacaaggtgaagttccgtaacaccgggcctgttcacccgctcacgaggcag
ccggtggtggacaagaaacggttcggcggtgtcaagttcggggagatggagcgcgactgc
ctcctcgcccatggtgccacggccaacctccatgaacggctgttcacactcagtgacctc
tcacagctgcacatctgccagggttgcgagcgggtggccaacgtgatcatgaggcctgtc
gaagggggcaagacggtccgtggtccctactgcgggttctgcaagtcggcggagaacata
ctgcagatcaaggtcccttacggcgcgaagctgctctaccaggagctgttcagcatgggg
atctgcctcaagtttgagaccgaagccagttag

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