Lolium rigidum (rigid ryegrass): 124683024
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Entry
124683024 CDS
T09103
Name
(RefSeq) long chain acyl-CoA synthetase 4-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd00061
Fatty acid biosynthesis
lrd00071
Fatty acid degradation
lrd01100
Metabolic pathways
lrd01212
Fatty acid metabolism
lrd04146
Peroxisome
Module
lrd_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
124683024
00071 Fatty acid degradation
124683024
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
124683024
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
lrd01004
]
124683024
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lrd04147
]
124683024
Enzymes [BR:
lrd01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
124683024
Lipid biosynthesis proteins [BR:
lrd01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
124683024
Exosome [BR:
lrd04147
]
Exosomal proteins
Exosomal proteins of breast milk
124683024
Exosomal proteins of breast cancer cells
124683024
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
124683024
NCBI-ProteinID:
XP_047073562
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Position
1:208205520..208212721
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AA seq
650 aa
AA seq
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MEFLVESGGAEANAGPTYRNVLAKDAGLLQSAPGLNSCWDVFRASVEKYPSNPMLGRRPV
VDGNAGDYAWMTYQEAYDVVMKLAASMSKSGVKQGERAGIYGANSPEWIISMEACNALGV
CCVPLYDTLGANAVEFITCHAELQIAFVEERKIEELLKTCHATSEYLKSIVSFGGVTNDQ
KEEAKNHGLSIFSWEEFLIMGGDHHVDLPEKKKSDICTIMYTSGTTGDPKGVMISNESLL
VNLAGADSVMQSIGEAFDQNDVYMSYLPLAHIFDRMFEEVFISHGSKIGFWRGDVKLLVD
DIGALKPTIFCAVPRVLDRIYSGLTTKISSGGILKKTLFNIAYKLKLDSMRKGIKHEKAS
PFFDKLVFSKVKERLGGKLRIIISGGAPLSVAVEEFLRVVTCAHVAQGYGLTETCAGTFV
ALPNNFSMSGTVGPPLQHTEVRLESVSEMGYDALASIPRGEVCVKGSVLFSGYYKREDLT
QEVMIDGWFHTGDVGEWQPNGSLKIIDRKKNIFKLSQGEYVAVENLENIYGVLPEIDSIW
VYGNSFESSLIAVINPNQQVLEQWAGQNGISGSLAELCENSGAKEHFVAELSKIAKEKKL
KGFEFIRAIHLDPLPFDMERDLITPTYKKKRPQMLKYYQGAIDALYKSMK
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggagttcttggtggagtcaggcggcgcggaggcgaatgccgggccgacgtaccggaac
gtgctggccaaggacgccggcctcctgcagtcggcgccgggactcaactcctgctgggat
gtcttccgggcttcggtggagaagtaccccagcaacccgatgctcggccgtcggccagtt
gttgatggcaacgccggtgactacgcctggatgacttaccaggaagcgtacgacgtcgtg
atgaaactggcggcctccatgagcaaatcgggagtcaaacagggcgaacgcgctggaatc
tacggtgcaaacagtccggaatggatcattagcatggaggcttgcaatgcccttggagtt
tgctgtgtgccgctctatgacactctaggtgctaatgcggtggaatttatcacgtgccac
gccgaactccagattgcttttgtggaagagagaaagattgaagagctcttgaaaacctgt
catgccacttcagagtatttgaaatcgatcgtcagctttggaggcgtcacaaatgaccaa
aaggaggaagctaagaaccatgggctttccattttctcatgggaggaattcctgatcatg
ggtggtgatcatcatgttgatcttcctgaaaagaagaaatccgacatctgcacaataatg
tacacaagtggaacaacaggggaccctaaaggtgttatgatatccaatgaaagccttctt
gttaacctggctggtgctgattctgtaatgcaatctattggtgaagctttcgatcaaaat
gacgtctatatgtcatatcttccactagctcatatcttcgatagaatgtttgaggaagta
ttcatttctcatggatcaaaaattggattctggcgcggggatgttaagttgttggttgac
gacatcggagcattaaaaccaacaatattttgtgctgttccacgtgttctcgacagaata
tattctggtcttacaaccaagatttcgtctggtggaatactgaagaaaaccttattcaat
attgcatacaagctgaaactagacagcatgaggaaaggaattaaacatgaaaaggcatcc
ccattctttgacaaattagttttcagcaaggtgaaagaaagactgggaggaaaattacgt
attattatatctggtggggctcctctttctgtagcggtggaagaatttttgagggttgta
acatgtgcacatgttgctcaaggatacggactcacggaaacttgtgccggaacttttgtt
gcactaccaaataatttctccatgagcggaactgttggcccaccacttcaacatacagaa
gttcgacttgagtcagtttcagagatgggctatgatgctttggcaagcattcctcgtggg
gaggtatgcgtgaagggaagtgttctattttctggatactacaaaagagaggacctaaca
caggaagtcatgattgatggatggtttcacacaggagatgttggtgagtggcaaccaaac
ggatcattgaaaatcattgacaggaagaaaaatatattcaagctttcacagggagaatat
gttgcagtggaaaatctagagaatatctatggtgttcttccagaaattgattcgatatgg
gtgtatgggaacagtttcgaatcttctcttattgctgttataaaccccaaccagcaagtg
cttgaacaatgggctggacaaaatggtatttctggaagtttggctgaactatgtgaaaac
tcgggagccaaagagcattttgttgctgaactttcaaagattgcaaaggaaaagaagctg
aaaggctttgagttcataagagccatccatcttgacccgttaccatttgatatggagcgg
gaccttatcaccccaacatacaagaagaaacgcccacaaatgctcaaatactaccaggga
gccatcgatgcactctacaaaagcatgaaataa
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