Lolium rigidum (rigid ryegrass): 124683698
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Entry
124683698 CDS
T09103
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
124683698
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124683698
03009 Ribosome biogenesis [BR:
lrd03009
]
124683698
04131 Membrane trafficking [BR:
lrd04131
]
124683698
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lrd04147
]
124683698
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
124683698
Ribosome biogenesis [BR:
lrd03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
124683698
Membrane trafficking [BR:
lrd04131
]
SNARE
SNARE associated proteins
Others
124683698
Autophagy
Aggrephagy
Other aggrephagy associated proteins
124683698
Exosome [BR:
lrd04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124683698
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_2
AAA_16
AAA_14
AAA_5
AAA_33
AAA_22
TIP49
CDC48_2
AAA_17
RNA_helicase
NPHP3_N
nSTAND3
AAA_28
Mg_chelatase
Parvo_NS1
AAA_18
ABC_tran
ATPase_2
NB-ARC
Viral_helicase1
AAA_7
nSTAND_NTPase5
Vps4_C
Zeta_toxin
IstB_IS21
AAA_24
NACHT
DUF815
Molydop_binding
Motif
Other DBs
NCBI-GeneID:
124683698
NCBI-ProteinID:
XP_047074119
LinkDB
All DBs
Position
1:270685701..270688061
Genome browser
AA seq
786 aa
AA seq
DB search
MESVSSSKKAANRLVVEEATTDDNSICNLHPATMDELSIFKGDLVLLKGKRRRATVCIVV
PDDTCEEHKLRINKVTRSNLRMRIADVVSVHLCPDAKYGRRVHVLPVDDTVEGITGNLFE
AYLKPYFADAYRPVHKGDLFLVRGGMRSVEFKVIEIDPAIDNYCIVAGDTEIFCDGEPVK
REDEERLDGIGYDDVGGMRKQMNQIRELVELPLRHPQIFKSLGVKPPKGILLYGPPGSGK
TLIARAVANETGAFFLCINGPEIMSKMAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAP
KREKTHGEVERRIVSQLLTLMDGMKARAHVIVMGATNRPNSIDPALRRFGRFDREIDIGV
PDEVGRLEVLRIHTKNMKLSEDVNLEVVAKDTHGYVGADLAALCTEAALQCIREKMDVID
LEDDTIDAEILNSMAITNDHLKTALVGTNPSALRETVVEVPNVSWSDVGGLDGVKRELQE
TVQYPVEHPEKFEKFGMLPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMW
FGESEANVREIFDKARQSAPCVLFFDELDSIAMQRGGSVGDAGGAADRVLNQLLTEMDGM
NAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEASRHQIFKACLRKSPVAKDVD
LGALARFTTGFSGADITEICQRACKYAIREDIEKDIERQRSGMEVDGGQEDEVAEIKAAH
FEESMKYARRSVSDDDIRKYQSFAQTLQQSRGFGTEFRFPAQPQASEVSPNAFDTSVAAD
EDDLYN
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atggagagcgtgtcgtcgtcgaagaaggcggcgaaccggctggtggtggaggaggcgacc
acggacgacaactccatctgcaacctccacccggccaccatggacgagctctccatcttc
aagggcgacctcgtgctgctcaagggcaagcgtcgccgcgccaccgtctgcatcgtcgtc
cccgacgacacctgcgaggagcacaagctcaggatcaacaaggtgacccgctccaacctc
aggatgcgcatcgccgacgtcgtgtccgtgcacctctgccccgacgccaagtacggtagg
cgcgtgcacgtcctccccgtcgatgacaccgtcgagggcatcacgggcaacctgttcgag
gcctacctcaagccctacttcgcggacgcctaccgcccggtgcacaagggcgacctcttc
ctcgtgcgcggcggcatgcggagcgtcgagttcaaggtcatcgagatcgaccctgccatc
gacaactactgcatcgtggcgggggacacggagatcttctgcgacggcgagccggtgaag
agggaggacgaggagaggctcgacggcatcggctatgacgacgtgggcggcatgcgcaag
cagatgaaccagatcagggagctggtcgagctgccgctcaggcacccgcagattttcaag
tctctcggcgtgaagcctcccaagggcatcctcttgtacggccctcccggctccggaaag
acgctgattgctcgtgccgtggccaacgagacaggagccttcttcttatgcatcaatggc
cccgagatcatgtccaagatggccggcgagagcgagagcaacttgaggaaggccttcgaa
gaggccgagaagaacgcgccgtccatcatcttcattgatgagatcgactccattgctcca
aagagggagaagacacacggcgaggtggagaggcgcatcgtgtcccagctgctgacgctc
atggacgggatgaaggcgcgagcgcacgtcatcgtcatgggcgccacgaaccgccccaac
agtatcgaccctgctctcaggcgcttcgggaggttcgaccgcgagatcgacattggcgtg
ccggacgaggtcggccgccttgaggttctacgcatccacaccaaaaacatgaagctctct
gaggatgttaacttggaggtggtcgccaaggacactcacgggtatgttggcgctgacttg
gccgcactctgcaccgaagcggcgctgcaatgtattagggagaagatggacgtgattgat
cttgaggatgacacaatcgacgccgagatcttgaactccatggctatcaccaacgaccac
ctcaagactgctctcgtcggcacgaacccttcggcgcttcgcgagaccgtcgtggaggtg
cccaacgtcagctggagcgacgtcggcggtctcgacggtgtcaagagggagctgcaggag
actgtgcagtacccggtggagcaccccgagaagtttgagaagttcggcatgttgccttcc
aagggcgtcctcttctacgggccaccaggctgcggcaagacgctgctggccaaggcgatc
gccaacgagtgtcaagccaacttcatcagcatcaaggggcccgagctgctcaccatgtgg
ttcggcgagagcgaggccaacgtccgtgagatcttcgacaaggcgaggcagtcggcgccg
tgcgtgctcttcttcgacgagctcgactcgatcgcgatgcagcgcggcgggagcgtggga
gacgccggcggtgcagccgacagggtcctgaaccagctgctgacggagatggatggcatg
aacgccaagaagacggtgttcatcatcggcgccaccaacaggccggacatcatcgactcg
gcgttgctccgtcccggccgcctcgaccagctcatatacatccccttgccggacgaggcc
tcgcgacaccagatcttcaaggcttgcctcaggaagtctcccgtggccaaggacgtcgac
ctcggtgcactcgcgaggttcacaacaggtttcagtggcgccgacatcacagagatttgc
cagagggcatgcaagtatgccatcagggaagacattgagaaggacatcgagaggcagagg
tcaggcatggaggtggacggcgggcaggaagatgaagtggctgagatcaaggcagctcac
ttcgaggagtcgatgaagtacgcgaggaggagtgtgagcgacgacgacatcaggaagtac
cagtcgtttgctcagacgctgcagcagtccaggggcttcggcaccgagttccgcttcccg
gcgcagccacaagcgtcagaagtttctcccaatgcctttgacacctcggtggcagccgat
gaggatgatctctacaactaa
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integrated database retrieval system
