Lolium rigidum (rigid ryegrass): 124683757
Help
Entry
124683757 CDS
T09103
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd00040
Pentose and glucuronate interconversions
lrd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
124683757
Enzymes [BR:
lrd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
124683757
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
124683757
NCBI-ProteinID:
XP_047074167
LinkDB
All DBs
Position
1:278781983..278783411
Genome browser
AA seq
445 aa
AA seq
DB search
MEGFQWNRPVSLVLYVVFFFLSSAAVSEANIAEYDEHWEQRRLQARAAAEATYHPDPVEV
TNSFNRAVHRAMKEESSARRQMLGKHHRFSGPCIATNPIDRCWRCRKDWATDRMRLAQCA
QGFGRNTTGGLGGKIYIVTDGSDDDVLEPRPGTLRWGVIQTEPLWIIFARSMLIELKEEL
LVGSDKTIDGRGAQVRFADGCQITVQYAHNVIIHNIHLNDLIVGKGGRIRDSPQHAGFRT
QSDGDGVSVFGSTKVWLDHLSLANCQDGLVDVIAESTGVTISNCHLTNHNDVMLFGSSDS
NPKDEIMQITVAFNHFGRGLVQRMPRCRWGFFHVVNNDYTHWLMYAIGGSKNPTIISHGN
RYIAPPNLAAKQITKQIGAAEAEWRNWVWHSQEDLLMNGAVFTNTGGDNQRKFDQNDLIN
PKDGSYVTRLTRFAGSMPCRPGKPC
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggaggggttccagtggaacaggcccgtctccctcgtcctttacgtcgtcttcttcttc
ctgtcgtcggcggccgtgtcggaggccaacatcgctgagtacgatgagcactgggagcag
cgcaggctgcaggcccgcgccgccgcggaggccacctaccaccctgaccccgtcgaggtc
accaacagcttcaaccgcgccgtccaccgagccatgaaggaggagagcagcgcgaggcgg
cagatgctgggcaagcaccacaggttcagcgggccgtgcatcgcgacgaacccgatcgac
cgctgctggcggtgccggaaggactgggcgacagaccggatgcgtctggcccagtgcgcg
caggggttcggccggaacaccacgggcgggctcggcgggaagatctacatcgtcacggac
ggcagcgacgacgacgtgctggaaccccgccccggcacgctccggtggggcgtgatccag
acggagccactgtggatcatcttcgccaggtccatgctgatcgagctcaaggaggagctg
ctggtcggcagcgacaagaccatcgacggccggggcgcgcaggtgcgcttcgccgacggg
tgccagatcaccgtgcagtacgcgcacaacgtcatcatccacaacatccacctcaacgac
cttatcgtcggcaagggcggcaggatccgggactcgccgcagcacgccggcttccgcacc
cagtccgacggcgacggcgtcagcgtcttcggctccaccaaggtctggctcgaccacctc
tccctggccaactgccaggacggcctcgtcgacgtcatcgccgagtccaccggcgtcacc
atctccaactgccacctcaccaaccacaacgacgtcatgctattcggctccagcgacagc
aaccccaaggacgagatcatgcagatcaccgtcgcctttaaccacttcggaagagggctc
gtgcagagaatgccaagatgccgatggggattcttccacgtcgtgaacaacgactacacc
cactggctcatgtacgccatcggcggcagcaagaacccgacgatcatcagccatggcaac
cggtacatcgcgccgccgaacctggctgcaaagcagatcaccaagcagataggcgccgcg
gaggcggagtggaggaactgggtgtggcactcacaggaggacctactgatgaatggtgcc
gtcttcaccaacaccggcggcgacaaccagaggaagttcgaccagaacgatctcatcaat
cccaaggacggatcatacgtcaccaggctcacacgatttgccggctccatgccttgcagg
cccggcaagccctgctaa
DBGET
integrated database retrieval system
