KEGG   Lolium rigidum (rigid ryegrass): 124683924
Entry
124683924         CDS       T09103                                 
Name
(RefSeq) exopolygalacturonase-like
  KO
K01213  galacturan 1,4-alpha-galacturonidase [EC:3.2.1.67]
Organism
lrd  Lolium rigidum (rigid ryegrass)
Pathway
lrd00040  Pentose and glucuronate interconversions
lrd01100  Metabolic pathways
Module
lrd_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:lrd00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    124683924
Enzymes [BR:lrd01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.67  galacturonan 1,4-alpha-galacturonidase
     124683924
SSDB
Motif
Pfam: Glyco_hydro_28 Pect-lyase_RHGA_epim Beta_helix
Other DBs
NCBI-GeneID: 124683924
NCBI-ProteinID: XP_047074296
LinkDB
Position
1:291554395..291555902
AA seq 404 aa
MAFPLAALFFLVTARWCLQVAHAGRQVFDVMDFGAIADGETDDSKAFLRTWTKACASPGR
PSVVVPKGEYRLHPVVFRGPCKGYMELRLSGVLRAPDDLAAFRGSHEWINFANVDGLLVT
GGGTFDGRGASSWHLNECPRNPNCTPLPVSIKLGRVRNVTITGVTSLDSKFFHVIIIGSQ
DVAIHRVTIRAPRDSPNTDGVHIQASSNVRITDTAVATGDDCVSVGPGSADITVSGVSCG
PGHGISVGSLGRRPGEQDVRGLRVSNCTFAGTANGVRIKTWRGGVRPGSVVSGLVFEDIV
MRKVRNPIIIDQDYCPYSSISCRHESAQLPSVVKISDVKFKNIRGVSATQVAVKLSCSGA
NPCHGLELRDIDLSYVKRSVATESRCANVAGGIAGGTLVPPSCI
NT seq 1215 nt   +upstreamnt  +downstreamnt
atggcgtttccccttgccgctctgttttttctggtcacggctaggtggtgcctgcaggtc
gctcatgccggccgccaggtgttcgacgtcatggacttcggcgcgatcgccgacggtgag
acggatgactccaaggcttttctacggacgtggaccaaggcctgcgcgtcgccggggagg
ccgtccgtggtggttcccaagggcgagtaccggcttcacccggtggtcttccgcggcccg
tgcaagggctacatggagctgcgcctctccggcgtcctccgcgcgccggacgacctggcc
gcgttccgcggcagccacgagtggatcaacttcgccaacgtcgacgggctgctcgtcacc
ggcggcggcacgttcgacggccgcggcgcctcgtcgtggcacctcaacgagtgccccagg
aatccgaactgcacgcccctccccgtctcgatcaagctggggcgcgtgaggaacgtgacg
atcacgggggtgacgtcgctggacagcaagttcttccacgtgatcatcatcggcagccag
gacgtggccatccaccgcgtcaccatccgggcgccgcgggacagccccaacacggacggc
gtccacatccaggcctcctccaacgtgcgcataaccgacaccgccgtcgccaccggggac
gactgcgtctccgtcggccccggcagcgccgacatcaccgtgtccggggtctcctgcggc
ccgggccacggcatcagcgtcggcagcctcgggaggcgcccgggggaacaggacgtgcgc
ggcctgcgcgtgtccaactgcaccttcgccggcacggccaacggcgtgcggatcaagacc
tggcgcggcggcgtccgcccgggctccgttgtgtccgggctcgtcttcgaggacatcgtc
atgaggaaggttcgcaaccccatcatcatcgaccaggattactgcccctacagctccatc
tcctgccgccatgaatcggcgcagctgccgtccgtggtcaagataagcgacgtcaagttc
aagaacatcaggggcgtgtcggccacgcaggtcgccgtgaagctgtcctgcagcggcgcg
aacccatgccatggcctagagctcagggacatcgaccttagttacgtcaagcgtagcgtc
gccaccgagtcgcggtgcgcgaatgtcgccggtggtatcgccggagggacgcttgtacct
ccctcgtgtatatga

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