Lolium rigidum (rigid ryegrass): 124684298
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Entry
124684298 CDS
T09103
Name
(RefSeq) RNA pseudouridine synthase 2, chloroplastic-like
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lrd03009
]
124684298
Enzymes [BR:
lrd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
124684298
Ribosome biogenesis [BR:
lrd03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
124684298
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Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-GeneID:
124684298
NCBI-ProteinID:
XP_047074599
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All DBs
Position
1:323977732..323981224
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AA seq
449 aa
AA seq
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MAAAVTAAPPPAIATTLSTLLRRSKNCIHSLRASRRRCIYSDVVAEPAPAPPPPSRRGGH
AGTRLEEAVPAGEGRSRVDAWISARLGGGGVSRARVQASIRAGLVAVNGRPVSKVSHTVK
GGDTVSCTVSDLTPLRAEAEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNANGTLVNAIL
HHCKISTFTCLARNSIDDECPESSDDDVDVFDVDQFNIGDVSSEVREAIVRPGIVHRLDK
GTSGLLVVAKDEHSHAQLAEQFKLHTISRVYLSLTCGLPSPYSARIEVPISRDPNNRIRM
VAAPGSGHRYAKDAASRYKVREVFCGGGSALVEWRLETGRTHQIRAHAKYLGNPLLGDET
YGATKSMALSLLRPKTPSKYHGDLSNLISKIDRPCLHAALLGFKHPHSGKALEFSCPPPD
DFTEVLDELRRVTLTSDGQDSDGVAQFSD
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggcagccgcagtgacggcggctccgccgccggccatcgccaccacgctctccaccctc
ctccgccgcagcaagaactgtatccattccctccgggcctctcgtaggagatgcatctac
tcagacgtggttgcggagcctgcgccggcgccgccgccgccaagccggaggggaggccac
gccgggacgcgcctggaggaggccgtgccggccggtgaggggaggtcgcgggtggacgcg
tggatctccgcgcggctgggcggcgggggcgtcagccgcgcgcgcgtgcaggccagcatc
cgcgccggcctcgtcgccgtcaatggccgccccgtctctaaggtttcgcatacggtgaag
ggaggggacacggtcagctgcactgtgtcggacctgacaccgctgagggcagaagcggag
gacattccactggacatcgtttacgaggatgagcatgttcttgtcgttaacaaaccggct
catatggttgttcatccagcaccagggaatgcaaatggcaccttagtcaatgctattctt
caccactgcaagatttcaacttttacctgtttagcacgtaactccatcgatgatgagtgc
cctgaatcttcggacgatgatgttgacgtatttgatgttgaccaatttaatattggtgac
gtaagttcagaggttcgtgaagctattgtgcgccctggtattgtgcataggcttgataag
gggacaagcggacttcttgttgtagctaaggatgagcattctcatgcccaattagcagaa
caattcaagctacatacaataagcagggtatacctcagtcttacttgtggtttacctagt
ccatattctgcgagaatcgaagtgcctatatcccgtgatccaaacaaccggatacgtatg
gttgctgcccctggatcaggccacagatatgcaaaggatgctgctagtaggtataaagta
agagaggtcttttgtggtggtggatctgcacttgtagagtggagattggagacagggcgc
actcaccagatccgagcacatgcaaaatatctagggaaccccctacttggtgatgaaaca
tatggagccacgaaaagcatggcgttgtcacttctaagacccaaaactccttcgaaatat
catggtgatctttcaaatctgatatcaaagatagacaggccatgtctccatgctgcattg
cttggattcaagcatcctcattctggaaaggcacttgaattctcgtgtccccctccagat
gattttaccgaggtacttgatgaactgcgtcgtgttacactgacaagtgatggccaagat
agtgatggtgttgcgcaattttctgattaa
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