Lolium rigidum (rigid ryegrass): 124684425
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Entry
124684425 CDS
T09103
Name
(RefSeq) peroxisome biogenesis protein 1-like
KO
K13338
peroxin-1
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
124684425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrd04131
]
124684425
Membrane trafficking [BR:
lrd04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
124684425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-1N
AAA_16
AAA_lid_3
AAA_22
ATPase_2
DUF815
NPHP3_N
AAA_5
AAA_28
Bac_DnaA
nSTAND3
RNA_helicase
AAA_18
AAA_19
AAA_14
ABC_tran
AAA_23
NACHT
AAA_7
IstB_IS21
TsaE
AAA_17
AAA_29
RuvB_N
AAA_33
AAA_24
AAA_2
NB-ARC
ATP_bind_1
Sigma54_activat
AAA_25
Mg_chelatase
AAA_30
ORC-CDC6-like
AAA_11
Rad17
KAP_NTPase
NTPase_1
T2SSE
Zeta_toxin
SRP54
AAA_lid_PRS2_C
Viral_helicase1
Cytidylate_kin
ATPase
cobW
KTI12
RNA12
Adeno_IVa2
AAA_13
T6SS_VipA
Motif
Other DBs
NCBI-GeneID:
124684425
NCBI-ProteinID:
XP_047074697
LinkDB
All DBs
Position
1:complement(335770482..335778906)
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AA seq
1047 aa
AA seq
DB search
MEVVVRTVPGVRSCFAALPLPVIQALERTAAAGSLPAVLALELRTPDRARWRLAWAGAVS
ASPNAVEVSQQFAACILLPDNTKASLSAVSVLPKAKFVSVEPVSEEDWEVLELNSELAEE
AILKQVGIIYDGMKFPLWLHDHNIVEFLVVSASPSNSIVQLVPGTEVAVAPKKRKDDSDS
NQCALKQDSLKEPPHKKALLRVQEAGEKYVHRFEYNGIQLGVFVTYVVHIHPDTAAKLSL
GDLQLVSITPKFSPKGSTENAKGSDQQIKGSVSGIKRNRHIVVHIILSNSVAKGHIMLPQ
SIRCYIGTGVHSWVYVQRFSPIVNKNTPSVKISPVYFKMMERNSESTSALDCQEQDNYQR
LGEISSSDHPPTDDKISIPRGFNDIAATANGEENYKLKQERSFIRSWLIGQLKGISTQIA
QLEINTVLLPSETLLHFQVINQTRGRPVDLIYLLTVTSDFGVKHKKMEPVMAIEYDIDNF
EQVVQQLDLNRAISLDSTTERASKYFEKRISVLLSSTSLKKISRINFPSPGNVLIYGPPG
SGKTTLCKAVARHFEEHKEILAHVVYIDCSKLAIENNKKQLQAIAEYIYEAIVHSPSIVL
FDDLDSLISVSPDNRKFQSSNSGAIAKYLVDMLDEYRDKSHGMCGYGPVAFVASVKSLKC
LPDELTSSGRFDLHVQVPGLSVPARIEILRQTIGKLHLICSEEIVSDIALKCDGYDAYDL
EIMVDKAVLATSDRLLGSSSVNLVEEDFLKAMKDFSPVAMRDISKFSPESSSGWEDVGGL
SEVVNVIKETIELPLKYPKFFAGAPVRLRSNILLYGPTGCGKTHVVRAVAAAYSLRFIPI
KGPELMNMYIGSSEQYRGKHGTQVTDRVVNQFLTELDGVEALTGVFVFAATNKPREIDAA
LLRPGRFDRLVFCDFPQRNERLDILRVLSKELPLASDVDLEPIASMTEGFSGADLKAILT
DAGLQAAKEAVQCQSGEVCSSTPQELPLITRGTLMSVASEARPSTSEEDRRSLREVFNQF
STSRKSSISTQRREVNGQTQRVAVAES
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggtggtgcgtacggttcctggagtccggagctgcttcgccgcgctccctctc
cccgtcatccaagcgctcgagcgtaccgccgccgccggctccctccccgccgtcctcgcc
ctcgagctgcgcacccctgaccgggcgcgctggcgcctcgcgtgggcaggcgccgtctcc
gcctcccccaatgcggtcgaggtttctcagcagtttgctgcgtgtattttgttacctgac
aatacaaaagcatcgctaagtgctgtttctgtgttgccaaaagccaaatttgtttccgtc
gagccagtaagcgaggaggactgggaagtattggagcttaactcagaactggcagaagag
gccattttgaaacaggttggtattatttatgatggtatgaaattcccattatggctgcac
gaccataacattgtggaatttcttgttgtttcagcatcacctagtaactcgatagttcaa
cttgttcctggaactgaagttgctgttgcaccaaagaaacgaaaagatgactcagattct
aatcagtgtgcccttaaacaagattcactcaaagaaccgccccataaaaaggcactgctc
cgtgttcaggaagcgggagagaaatatgtacaccgatttgaatataacgggattcaactg
ggtgtgtttgttacatatgttgtgcacatacacccagatactgctgcaaaattgtctctc
ggtgatctccagttggtcagtatcacccctaaattctcgccaaaggggagtacagaaaat
gcaaaaggatctgatcagcagattaagggttcagtgtctggtataaagaggaataggcac
atcgttgtccatatcatattatcaaattctgttgctaaagggcatattatgcttcctcaa
tccatccgctgttacattggaacaggtgttcattcatgggtttatgtgcagagattctca
cccattgtgaataagaatacaccgtcagtaaaaatttccccagtctactttaagatgatg
gagagaaattctgaaagtaccagtgcattagactgtcaagaacaggataattatcaaagg
ctaggcgagatatcttcatctgatcatcctcccacggatgataagatcagcataccgcgt
gggttcaatgatattgctgcaactgcgaatggggaggaaaattataagttgaagcaggag
aggtctttcatcagatcatggcttattgggcagctaaagggaatctccactcagattgcc
caacttgaaataaatacagtgcttctgccatctgaaacattacttcactttcaagtgatt
aatcaaacaagaggcagacctgttgatctcatctacctcttgacggttacttctgatttt
ggtgtcaagcacaagaaaatggaacctgtcatggcaattgaatatgatattgataacttc
gaacaggttgttcagcagttagacttgaatagagctatatcgcttgattcaacaacggaa
cgagcaagcaaatattttgaaaaaaggataagtgtccttttatcttcaacatctctaaaa
aaaatcagtagaataaacttcccttccccaggaaatgttcttatctatggccctccaggt
tctgggaaaacaaccttgtgcaaagctgttgcaagacactttgaagaacataaagaaatt
ctagctcatgtggtttatatagactgctcaaagttagctattgagaataacaagaagcaa
cttcaagcaattgcagagtatatctatgaagctattgtccactctccctcaattgtatta
tttgatgatctggatagtctaatttcagtctccccggacaacagaaaatttcagtcctct
aattctggtgctattgcgaaatacttggtagacatgctagacgagtacagagataaaagc
catggcatgtgtggatatgggcctgttgcatttgtggcttcagttaagtcacttaagtgc
cttcccgatgagttgacttcctcagggagatttgatcttcatgtccaagttcctggtctg
tctgtacctgcgcgtatagagatacttaggcagacaattggcaagcttcacttaatatgt
tctgaggaaattgtcagtgatattgcgttgaaatgtgatggttatgatgcatatgatttg
gaaattatggttgataaggctgtgctggctacttctgatcgtttgcttgggtcttctagt
gtaaatctggtggaggaagacttcctgaaagccatgaaggacttttctcctgttgcaatg
cgtgatattagtaaattttctcctgaaagtagcagtggatgggaagacgttggaggactt
tccgaagttgtaaatgttataaaagagactattgaattgccattaaaatatccgaagttt
tttgctggggctcccgtaaggttgcgatcgaacatcctcttgtatggcccaacaggctgc
ggtaaaacccatgttgtgagagctgtagctgctgcatattctttacgtttcattccgatc
aaggggccagaattgatgaatatgtatattggttcttctgaacaatatcgaggaaaacat
ggtacacaagttactgatcgtgttgtcaaccagtttttgacggaattagatggtgtcgaa
gctctgacaggagtatttgtatttgctgccaccaacaagccacgtgaaattgatgctgca
ctgttacgacctggaagatttgatcggcttgtgttttgtgactttccccaacggaatgag
cgtctggacattctcagggtgctctccaaggagcttcctctggcaagcgatgtcgatctg
gaaccaattgcatcaatgacggaagggttcagtggtgctgatctgaaagctatactcaca
gacgctgggctgcaagctgccaaggaggccgtgcaatgccaatctggagaagtttgtagc
agtaccccacaagagctgccgctgatcaccagaggaactctcatgtctgttgcttcggag
gctaggccatcaacatcagaggaggacaggaggagcctgagggaggtgttcaaccaattc
tcaacctctaggaagtcttcaatttccacccagagaagggaagttaatggccagacccaa
agggtagctgtagccgagtcatga
DBGET
integrated database retrieval system