KEGG   Lolium rigidum (rigid ryegrass): 124684425
Entry
124684425         CDS       T09103                                 
Name
(RefSeq) peroxisome biogenesis protein 1-like
  KO
K13338  peroxin-1
Organism
lrd  Lolium rigidum (rigid ryegrass)
Pathway
lrd04146  Peroxisome
Brite
KEGG Orthology (KO) [BR:lrd00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    124684425
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lrd04131]
    124684425
Membrane trafficking [BR:lrd04131]
 Autophagy
  Pexophagy
   Other pexophagy associated proteins
    124684425
SSDB
Motif
Pfam: AAA PEX-1N AAA_16 AAA_lid_3 AAA_22 ATPase_2 DUF815 NPHP3_N AAA_5 AAA_28 Bac_DnaA nSTAND3 RNA_helicase AAA_18 AAA_19 AAA_14 ABC_tran AAA_23 NACHT AAA_7 IstB_IS21 TsaE AAA_17 AAA_29 RuvB_N AAA_33 AAA_24 AAA_2 NB-ARC ATP_bind_1 Sigma54_activat AAA_25 Mg_chelatase AAA_30 ORC-CDC6-like AAA_11 Rad17 KAP_NTPase NTPase_1 T2SSE Zeta_toxin SRP54 AAA_lid_PRS2_C Viral_helicase1 Cytidylate_kin ATPase cobW KTI12 RNA12 Adeno_IVa2 AAA_13 T6SS_VipA
Other DBs
NCBI-GeneID: 124684425
NCBI-ProteinID: XP_047074697
LinkDB
Position
1:complement(335770482..335778906)
AA seq 1047 aa
MEVVVRTVPGVRSCFAALPLPVIQALERTAAAGSLPAVLALELRTPDRARWRLAWAGAVS
ASPNAVEVSQQFAACILLPDNTKASLSAVSVLPKAKFVSVEPVSEEDWEVLELNSELAEE
AILKQVGIIYDGMKFPLWLHDHNIVEFLVVSASPSNSIVQLVPGTEVAVAPKKRKDDSDS
NQCALKQDSLKEPPHKKALLRVQEAGEKYVHRFEYNGIQLGVFVTYVVHIHPDTAAKLSL
GDLQLVSITPKFSPKGSTENAKGSDQQIKGSVSGIKRNRHIVVHIILSNSVAKGHIMLPQ
SIRCYIGTGVHSWVYVQRFSPIVNKNTPSVKISPVYFKMMERNSESTSALDCQEQDNYQR
LGEISSSDHPPTDDKISIPRGFNDIAATANGEENYKLKQERSFIRSWLIGQLKGISTQIA
QLEINTVLLPSETLLHFQVINQTRGRPVDLIYLLTVTSDFGVKHKKMEPVMAIEYDIDNF
EQVVQQLDLNRAISLDSTTERASKYFEKRISVLLSSTSLKKISRINFPSPGNVLIYGPPG
SGKTTLCKAVARHFEEHKEILAHVVYIDCSKLAIENNKKQLQAIAEYIYEAIVHSPSIVL
FDDLDSLISVSPDNRKFQSSNSGAIAKYLVDMLDEYRDKSHGMCGYGPVAFVASVKSLKC
LPDELTSSGRFDLHVQVPGLSVPARIEILRQTIGKLHLICSEEIVSDIALKCDGYDAYDL
EIMVDKAVLATSDRLLGSSSVNLVEEDFLKAMKDFSPVAMRDISKFSPESSSGWEDVGGL
SEVVNVIKETIELPLKYPKFFAGAPVRLRSNILLYGPTGCGKTHVVRAVAAAYSLRFIPI
KGPELMNMYIGSSEQYRGKHGTQVTDRVVNQFLTELDGVEALTGVFVFAATNKPREIDAA
LLRPGRFDRLVFCDFPQRNERLDILRVLSKELPLASDVDLEPIASMTEGFSGADLKAILT
DAGLQAAKEAVQCQSGEVCSSTPQELPLITRGTLMSVASEARPSTSEEDRRSLREVFNQF
STSRKSSISTQRREVNGQTQRVAVAES
NT seq 3144 nt   +upstreamnt  +downstreamnt
atggaggtggtggtgcgtacggttcctggagtccggagctgcttcgccgcgctccctctc
cccgtcatccaagcgctcgagcgtaccgccgccgccggctccctccccgccgtcctcgcc
ctcgagctgcgcacccctgaccgggcgcgctggcgcctcgcgtgggcaggcgccgtctcc
gcctcccccaatgcggtcgaggtttctcagcagtttgctgcgtgtattttgttacctgac
aatacaaaagcatcgctaagtgctgtttctgtgttgccaaaagccaaatttgtttccgtc
gagccagtaagcgaggaggactgggaagtattggagcttaactcagaactggcagaagag
gccattttgaaacaggttggtattatttatgatggtatgaaattcccattatggctgcac
gaccataacattgtggaatttcttgttgtttcagcatcacctagtaactcgatagttcaa
cttgttcctggaactgaagttgctgttgcaccaaagaaacgaaaagatgactcagattct
aatcagtgtgcccttaaacaagattcactcaaagaaccgccccataaaaaggcactgctc
cgtgttcaggaagcgggagagaaatatgtacaccgatttgaatataacgggattcaactg
ggtgtgtttgttacatatgttgtgcacatacacccagatactgctgcaaaattgtctctc
ggtgatctccagttggtcagtatcacccctaaattctcgccaaaggggagtacagaaaat
gcaaaaggatctgatcagcagattaagggttcagtgtctggtataaagaggaataggcac
atcgttgtccatatcatattatcaaattctgttgctaaagggcatattatgcttcctcaa
tccatccgctgttacattggaacaggtgttcattcatgggtttatgtgcagagattctca
cccattgtgaataagaatacaccgtcagtaaaaatttccccagtctactttaagatgatg
gagagaaattctgaaagtaccagtgcattagactgtcaagaacaggataattatcaaagg
ctaggcgagatatcttcatctgatcatcctcccacggatgataagatcagcataccgcgt
gggttcaatgatattgctgcaactgcgaatggggaggaaaattataagttgaagcaggag
aggtctttcatcagatcatggcttattgggcagctaaagggaatctccactcagattgcc
caacttgaaataaatacagtgcttctgccatctgaaacattacttcactttcaagtgatt
aatcaaacaagaggcagacctgttgatctcatctacctcttgacggttacttctgatttt
ggtgtcaagcacaagaaaatggaacctgtcatggcaattgaatatgatattgataacttc
gaacaggttgttcagcagttagacttgaatagagctatatcgcttgattcaacaacggaa
cgagcaagcaaatattttgaaaaaaggataagtgtccttttatcttcaacatctctaaaa
aaaatcagtagaataaacttcccttccccaggaaatgttcttatctatggccctccaggt
tctgggaaaacaaccttgtgcaaagctgttgcaagacactttgaagaacataaagaaatt
ctagctcatgtggtttatatagactgctcaaagttagctattgagaataacaagaagcaa
cttcaagcaattgcagagtatatctatgaagctattgtccactctccctcaattgtatta
tttgatgatctggatagtctaatttcagtctccccggacaacagaaaatttcagtcctct
aattctggtgctattgcgaaatacttggtagacatgctagacgagtacagagataaaagc
catggcatgtgtggatatgggcctgttgcatttgtggcttcagttaagtcacttaagtgc
cttcccgatgagttgacttcctcagggagatttgatcttcatgtccaagttcctggtctg
tctgtacctgcgcgtatagagatacttaggcagacaattggcaagcttcacttaatatgt
tctgaggaaattgtcagtgatattgcgttgaaatgtgatggttatgatgcatatgatttg
gaaattatggttgataaggctgtgctggctacttctgatcgtttgcttgggtcttctagt
gtaaatctggtggaggaagacttcctgaaagccatgaaggacttttctcctgttgcaatg
cgtgatattagtaaattttctcctgaaagtagcagtggatgggaagacgttggaggactt
tccgaagttgtaaatgttataaaagagactattgaattgccattaaaatatccgaagttt
tttgctggggctcccgtaaggttgcgatcgaacatcctcttgtatggcccaacaggctgc
ggtaaaacccatgttgtgagagctgtagctgctgcatattctttacgtttcattccgatc
aaggggccagaattgatgaatatgtatattggttcttctgaacaatatcgaggaaaacat
ggtacacaagttactgatcgtgttgtcaaccagtttttgacggaattagatggtgtcgaa
gctctgacaggagtatttgtatttgctgccaccaacaagccacgtgaaattgatgctgca
ctgttacgacctggaagatttgatcggcttgtgttttgtgactttccccaacggaatgag
cgtctggacattctcagggtgctctccaaggagcttcctctggcaagcgatgtcgatctg
gaaccaattgcatcaatgacggaagggttcagtggtgctgatctgaaagctatactcaca
gacgctgggctgcaagctgccaaggaggccgtgcaatgccaatctggagaagtttgtagc
agtaccccacaagagctgccgctgatcaccagaggaactctcatgtctgttgcttcggag
gctaggccatcaacatcagaggaggacaggaggagcctgagggaggtgttcaaccaattc
tcaacctctaggaagtcttcaatttccacccagagaagggaagttaatggccagacccaa
agggtagctgtagccgagtcatga

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