Lolium rigidum (rigid ryegrass): 124684582
Help
Entry
124684582 CDS
T09103
Name
(RefSeq) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
124684582
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lrd03400
]
124684582
Enzymes [BR:
lrd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
124684582
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
124684582
DNA repair and recombination proteins [BR:
lrd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
124684582
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
Fpg-like_C
NFACT_N
Motif
Other DBs
NCBI-GeneID:
124684582
NCBI-ProteinID:
XP_047074817
LinkDB
All DBs
Position
1:complement(349328048..349331597)
Genome browser
AA seq
448 aa
AA seq
DB search
MPELPEVEAARRALEAHCVGRRIARCAVADDTKVVLSDRVAFERAMVGRTIVAARRRGKN
LWLQLDAPPFPSFQFGMAGAIYIKGVAVTKYKRSAVKSTDEWPSKYSKFFVELDDGLEFS
FTDKRRFARVRLFDDPETVPPISELGPDALFEPMSVDNFVESLRKKKIGIKALLLDQSFV
SGIGNWIADEVLYQSRIHPLQIASSLTRESCEALHQSIQEVVKYAVDVDADSDRFPIEWL
FHHRWGKKPGKVDGKKIEFITAGGRTTAYVPQLQKLTGTKAVVADPGQVSNDGVAKEAGE
DGDDDDDPKPRKRVAVSRAARGKPPSRKTNPVQVSEDGGAKEVGADGDDDDLKPRKRVAT
SRAARGQQSKDDASAPSRKTGEIAGAKKKPSIEHGSKNNVKTVESDGAGATGNNDHGLVE
PSVAVHRVSDHGVARTSSRKKTKPVKYQ
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgccggagctgccggaggtggaggcggcgcggcgggcgctggaggcgcactgcgtgggc
cggcgcatcgcgcgctgcgccgtcgcagacgacaccaaggtcgtcctatccgaccgcgtc
gccttcgagcgcgccatggtcggcaggaccatcgtcgccgcgcgcaggaggggcaagaac
ctctggctccagctcgacgccccgccattcccctccttccagttcggaatggcaggtgca
atctacatcaagggtgtcgccgtcacaaagtacaagagatcagccgtcaagtccacggac
gagtggccctccaagtactccaagtttttcgtcgagcttgatgatggcttggagttttca
ttcactgataagaggcgctttgcaagagttcggttgtttgatgatcctgaaactgtaccc
ccaatttctgagctaggtccagatgctctctttgagccgatgtctgttgacaattttgtg
gaatcactgagaaagaagaagattggaataaaagctcttttacttgatcagagctttgta
tcaggcattggtaattggattgcagatgaagtgctttaccagtcgagaatccatccgtta
cagattgcttcaagcctaacaagggagagttgtgaagcactacaccaaagcatccaagag
gttgtgaaatatgctgtcgatgttgatgctgattctgaccgctttcccattgaatggttg
tttcatcaccgctggggcaaaaagcctggtaaagttgatggaaagaaaattgaattcata
acagctggtggcaggactactgcgtatgtcccacaactgcagaagctgactggaaccaaa
gcggtagtggctgacccagggcaagtgagcaacgatggtgtcgcaaaggaagcaggggaa
gatggagatgatgatgatgatccgaagccaagaaagagagtggccgtatccagggctgcc
aggggaaagcctccttccagaaaaactaacccagtgcaagtgagcgaggatggtggcgcc
aaggaagtcggggcagatggagatgatgatgatctgaagccaagaaagagagtggctaca
tccagagctgccaggggacagcaaagcaaggatgacgcaagtgctccctcaaggaaaaca
ggggaaattgctggtgccaagaagaaaccaagcattgaacatggcagcaaaaacaatgtc
aagactgttgaatcagacggagctggtgccactggcaacaatgatcatggcttagtcgaa
cctagtgtggctgtgcacagggtatcagaccatggcgttgcaagaacatcttcaaggaag
aagaccaagcctgtcaagtatcagtag
DBGET
integrated database retrieval system
