Lolium rigidum (rigid ryegrass): 124684861
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Entry
124684861 CDS
T09103
Name
(RefSeq) coatomer subunit beta'-1 isoform X1
KO
K17302
coatomer subunit beta'
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrd04131
]
124684861
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lrd04147
]
124684861
Membrane trafficking [BR:
lrd04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
124684861
Exosome [BR:
lrd04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
124684861
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
WD40_CDC20-Fz
Beta-prop_WDR75_1st
EIF3I
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_SCAP
Beta-prop_HPS5
WDR90_beta-prop_4th
PEP5_VPS11_N
Clathrin
WD40_RFWD3
TPR_GEMI5
Beta-prop_WDR75_2nd
Beta-prop_WDR35_TULP_N
TPR_1
TPR_8
Beta-prop_SPT8
TPR_2
HEAT_GCN1
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
124684861
NCBI-ProteinID:
XP_047075069
LinkDB
All DBs
Position
1:complement(7416928..7426474)
Genome browser
AA seq
911 aa
AA seq
DB search
MPLRLEIKRKFAQRSERVKSVDLHPTEPWILASLYSGSVCIWDYQSQTMVKSFETSELPV
RSAKFVSRKQWVVAGADDMHIRVYNYNTMDKVKVIDAHTDYIRCVAVHPTLPYVLSSSDD
MLIKLWDWDKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTTKIWSLGSPDPNFT
LDGHQKGVNCVDYFTGGDRPYLITGSDDSTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE
LPIIITGSEDGTVRIWHSTTYRLENTLNYGLERVWAVGYMKGSRRMVIGYDEGTIMIKMG
REVPVASMDSSGKVIWAKHNEIQTVNIKSVGANFEATDGERLPLAVKELGSCDLYPQNLK
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFAWSSEGEYAIRESTSRIKLFNKSFQ
EKKTIRPAFSAERIFGGVLLAMCSSDFICFYDWADCRLIRRIDVNVKNVYWADSGDLVAI
ASDTSFYILKYNRDVVAAYLEGGKPVDEEGAEDAFELLHEINERVRTGIWVGDCFIYNNS
SWRLNYCVGGEVTTMYHLDRPMYLLGYLANQSRVYLIDKQFNVIGYTLLLSLIEYKTLVM
RGDLESANEILPSIPKAQYNSVAHFLESRGMLEEALEIATDADYKFDLAVQLGKLEIAKD
IAVEAQSESKWKQLGELAMSTGKLEAAEECLLQAKDLSGLLLLYSSLGDAGGIEKLASLA
KEHGKNNVAFLCLFMLGKLENCIQLLVDSNRIPEAALMARSYLPSKVSEIVALWRKDLSK
VNPKAADSLADPAEYPNLFEDWQVALTVEQNVAAQRGHYPSADEYLNYAEKSDSTLVEAF
KRMQVIEDEEEVDALDESGEPDEEVMEENEMEENTDEAVQVDTDEPEETVLVNGTEGEEQ
WGTNNEGTSPA
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgccgctcaggttggagatcaagaggaagttcgcgcagcggtcggagagggtcaagtcg
gtggatctgcaccccacggagccatggatcctggccagcttgtactcgggaagtgtgtgc
atctgggactatcagtcgcagaccatggtgaaatcatttgaaacttcagagctgccagtg
cggtcggcaaaatttgtgtcaaggaaacaatgggttgtagctggtgcagatgatatgcac
attcgtgtctacaactacaatactatggacaaagttaaagttatcgacgctcatactgat
tacatcagatgtgttgcagtccatccaactcttccatatgtgctttcatcatctgatgac
atgttgataaagctgtgggactgggacaaagggtggatgtgcactcaaatctttgagggg
cattcacactatgtcatgcaggttactttcaatcctaaggatactaacactttcgcaagt
gcatcccttgaccgcactacaaagatatggagtttgggttctccagatccaaattttacc
cttgatggacatcaaaagggtgtgaactgtgttgattactttactggtggtgacaggccc
tatttgattactggttctgatgactccactgcaaaggtctgggattaccaaactaagagc
tgtgttcagacacttgaaggccatacacacaacgtttctgctgtttgtttccatcctgag
cttcctataatcattactggatctgaagatgggacagttcgtatctggcattcgacaact
tacaggcttgaaaacacactaaactatggccttgaacgagtctgggctgttggatacatg
aagggatcaagaagaatggtgattggttatgatgagggaactattatgattaaaatgggc
cgcgaagtacctgttgcaagtatggatagcagtggaaaagtcatttgggcaaaacataac
gagatacaaactgtgaatataaagagtgttggtgcaaactttgaggctacagatggggaa
agattgcccctggctgtgaaggagttgggaagctgtgatctttacccacagaacttgaag
cataaccccaacggcagatttgtagttgtatgcggagatggtgaatacataatctataca
gcactggcttggaggaatagatcatttggatcagcattagagttcgcttggtcatccgaa
ggagagtatgcaatcagagaaagtacatcaagaataaagcttttcaataaatcattccag
gagaagaaaaccatccgccctgcattctctgcagagcgaatctttggcggtgtacttttg
gcaatgtgttctagtgacttcatttgcttttatgactgggctgactgtagactaatacgc
cgaattgatgtgaatgtcaagaatgtctactgggcggatagtggtgacctagttgcaata
gcaagtgatacatcgttctacatcctgaagtacaacagagatgttgttgctgcttatcta
gaaggtggaaagcctgtggatgaggaaggcgctgaagatgcttttgagctgcttcatgag
atcaatgagcgagtgcgaacagggatctgggttggagactgctttatttataacaactca
tcttggcgcttaaactattgtgttggtggcgaggtcacaacgatgtatcacttggatcgc
cctatgtatttgttgggatatcttgcaaatcaaagtcgagtttatcttattgacaagcag
tttaatgtcattggctatacattacttctcagtttgattgaatacaagacgcttgtgatg
cgtggggatttggaaagtgcaaacgagattttaccatccataccgaaggcgcaatataat
agcgttgctcatttcttggagtccagaggaatgttggaggaggctcttgagatagccact
gatgctgattataagtttgatttggctgtgcagcttggaaaattagaaatcgcgaaggat
attgccgtagaagcacaaagtgaatcgaagtggaagcagttgggtgagcttgccatgtcc
actggcaagcttgaggcggcggaagagtgccttttgcaggcgaaggatttaagtggcttg
ttattactgtactcctctcttggagatgctggaggaattgaaaagcttgcttctctagca
aaagagcacgggaaaaacaatgttgctttcctctgcctctttatgcttggtaaattggaa
aattgcatacagttgcttgtagacagcaatcgtatacctgaagctgcattaatggcacgt
tcttatcttcccagcaaagtttcagagatagtagcattatggagaaaggacctcagtaaa
gttaatcctaaagctgcagactctctggcagatcctgctgagtatccaaatttatttgaa
gactggcaggttgcacttacagtagaacagaatgttgctgcccagagggggcactatcct
tctgctgatgagtacttgaactatgctgagaagtcagacagtactcttgtggaagctttc
aaaaggatgcaggtcattgaagacgaggaagaagtagatgcactggatgaaagtggagag
cctgatgaagaggtaatggaagagaatgaaatggaggaaaacaccgatgaagctgtccaa
gttgatactgatgaacctgaagaaactgttcttgtaaatgggactgagggtgaggaacag
tggggtacgaacaatgaaggaacttcgccagcctaa
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