Lolium rigidum (rigid ryegrass): 124684882
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Entry
124684882 CDS
T09103
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lrd03036
]
124684882
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
lrd00535
]
124684882
Chromosome and associated proteins [BR:
lrd03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
124684882
Meiosis-specific proteins
Cohesin complex and associated proteins
124684882
Proteoglycans [BR:
lrd00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
124684882
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
MscS_porin
AAA_29
Motif
Other DBs
NCBI-GeneID:
124684882
NCBI-ProteinID:
XP_047075097
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All DBs
Position
1:complement(<9742965..9748229)
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AA seq
1204 aa
AA seq
DB search
MYIKKVVIEGFKSYREETSTEPFSPKVNVVVGANGSGKSNFFHAIRFVLSDMFQNLRSED
RGALLHEGAGHSVVSAFVEIVFDNSDNRIPVDKEEVRLRRTVASKKDEYYLDGKHVSKTE
VMNLLESAGFSRSNPYYVVQQGKIASLTLMKDSERLDLLKEIGGTRVYEDRRRESLKIMQ
ETANKRKQIDQVVRYLEDRLRELDEEKEELKKYQQLDKQRRSLEYTILDHELNDARNELA
SMDDNRRKISERMSNADNEVVDLREKVKSFDKEIKVSTKGINETRSEKDDAEKKRTEALK
VVSQIELDLRDIKDRISSEKRAKDEAIRDLHSMKKESEKSKSELAQISRVHAAKLKEEEE
ISKSIMDREKRLSILYQKQGRATQFKNEAARDEWLRKEIHDLERVLLSNRKQESLLQDEI
QKLKDEINNLTNYIESRKSESSKLEAALANKQKDHNDFMKQKNALQDERKSFWKEENSVT
AEINGLKGDLVKAQKSLDHATPGDIRRGLNSVSRIIRDHNIAGVFGPVLELVDCEEKFFT
AVEVTAANSLFHVVVENDDISTKIIQVLTREKGGRVTFIPLNRVHAPNVNVPQSSDFVPL
LKKLKFRPDHRRAFEQVFGRTVICRDLETATRVARSNSLDCITLDGDQVARKGGMTGGFY
DSRRSRLKFVKIIRDNKTEIEKKTAHLENVGKKLKDIDKKITDLITKHQQMDAERDHAKS
ELEQFKVDITSAMKQMGALEKALGKKEKSLDNIRNQIEQIQSGITMKNDEMGTELIDQLT
LEERDLLSRLNPEITGLKEKFLSCKNSRIEIETRKEELETNLSTNLMRRQKELEAIISSA
DSKTLPVEVESKEQELKQSKRSLDEATTVLKANVDAINNFTKKMEQLKRQRDDLKALEAK
LEQTVQDGTKDLEQLMNSRTVYLAKQDECMKKIRDLGSLPADAFEAYKRKNKKQLQKLLY
DCNEQLKQFSHVNQKALDQYVNFTEQREQLQRRRAELDAGDEKIRELISVLDQRKDESIE
RTFKGVAKHFREVFAELVQGGHGYLVMMKKKDGDAGDEDNDEDGPREPDPEGRIEKYIGV
KVKVSFTGKGETQSMKQLSGGQKTVVALTLIFAIQRCDPAPFYLFDEIDAALDPQYRTAV
GSVVRRLADSADTQFIATTFRPEILKVADKIYGVTHKNRVSYINVVSKDQAMDFIEHDQT
HNAS
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgtacatcaagaaggttgtaatcgaaggctttaaaagctacagggaggagacgtcgacg
gagcctttcagccccaaagttaacgtagttgttggcgcaaatggatcgggcaaatcaaac
tttttccatgctatacgctttgtcctgagcgacatgtttcaaaatctgcgcagtgaggat
aggggagctcttctccatgaaggtgctggacactcagttgtatctgcttttgttgagata
gtgtttgataattcagacaaccgtattccagttgataaagaagaggtacgcttgcgaagg
acggttgcttcaaagaaggatgaatactacttggatgggaaacatgtcagtaaaactgaa
gtcatgaatctactggagagtgctggtttctctcgctctaatccatactatgttgtccag
caggggaagattgcatcccttactctaatgaaagattctgaacgactggatcttctcaaa
gagattggtggtacacgtgtttacgaagatagacgccgggaaagcttgaaaataatgcaa
gaaacagccaataaaaggaagcagattgatcaagttgtccgctatctggaggaccgactg
agagaacttgatgaagagaaggaagaactcaagaagtaccagcagctggacaaacaaaga
agatcacttgaatatactatattggaccatgaactaaatgatgctagaaatgaattagcc
tcgatggatgataatcgaagaaaaatttctgaaaggatgtcgaatgctgacaatgaagtg
gtagatttacgtgagaaggtcaagagttttgataaagaaataaaagtctctacaaaaggg
attaatgaaaccaggtctgaaaaggacgatgcagagaagaagcgtactgaggcactgaag
gtagtctctcagattgaacttgatctgagagatataaaagacagaatttcgagtgaaaaa
cgagcaaaggatgaagccataagggatttgcatagcatgaagaaagaaagtgaaaagtca
aagtctgaattggctcaaattagtagggtgcacgcggccaaattgaaagaagaggaagag
atatcgaaaagcataatggaccgtgagaagcggctgagtatattgtaccaaaagcagggg
agggcaactcaatttaagaatgaggctgccagagatgagtggcttaggaaagaaatccat
gatcttgagcgtgtacttttgtcaaatagaaagcaggaaagcttacttcaagatgaaatt
cagaagcttaaagatgaaattaataacttgacgaactacattgagtcccggaaaagcgaa
tcaagcaagttagaggctgctctcgcaaacaagcaaaaggatcacaatgactttatgaag
cagaaaaatgcacttcaagatgaaagaaaatcattttggaaggaggaaaatagtgtgaca
gctgaaatcaatgggctaaagggtgatcttgtcaaggcacagaagagtttggaccatgca
acacctggggatatcaggagaggactcaattctgttagcagaatcatcagggaccataat
attgcaggcgtttttggtccagtgttagaactggttgactgtgaagagaagttttttacg
gctgtggaggtcactgctgcaaatagcttgttccatgtggtggttgaaaatgatgatata
tcaacaaagataattcaggtattgacgcgagaaaaaggtggaagggtgactttcatacca
ctgaatagagtgcatgctccgaacgtcaatgttccacagagttctgattttgttccattg
ttaaagaagttgaagtttcgtcccgatcaccgtcgtgcttttgaacaggtttttggtagg
acagttatatgccgagacctggaaactgcgaccagagttgcacgcagcaatagtctagat
tgcatcacacttgatggtgatcaagtagcaagaaaaggtggcatgacaggaggtttctat
gactctagacgctcaagactgaagttcgtaaaaataatcagggacaataaaacagaaatt
gagaaaaagacggcacatttagagaacgtggggaaaaaactaaaagatatagataaaaaa
atcacggatttgattaccaaacatcagcaaatggatgctgaacgtgatcatgccaaatcg
gagctggaacagtttaaagttgatattaccagtgcaatgaagcagatgggagcacttgag
aaagcccttggaaagaaggaaaaatcacttgacaacatccgcaaccaaattgagcaaatc
cagtctggcatcacaatgaagaatgatgagatgggaactgaactgattgaccagttaact
ttagaagaaagagatcttctttcacgattgaatcctgaaatcacgggattgaaggagaag
ttcctctcgtgtaaaaacagtcgcatcgagattgaaacaagaaaggaagaactggagact
aatttatcaactaatcttatgaggcgtcagaaagagctggaagcaatcatttcatctgca
gattctaaaaccttgcctgttgaagtcgagtcaaaagagcaagaattgaaacagtcgaag
aggagtcttgatgaggcgactacagtactgaaagctaatgttgatgctattaataacttc
acgaaaaagatggagcaactgaaacgacaaagggatgatctgaaggctcttgaagctaag
ttggagcagactgtgcaagatgggacgaaggacttggaacagttgatgaacagtaggacc
gtgtatctagccaaacaagatgagtgtatgaagaaaatccgagatttgggctcattgcct
gctgatgcatttgaggcgtacaagaggaaaaacaagaagcagctacagaagctgctttat
gactgcaatgagcagttgaagcaatttagtcatgtcaaccaaaaggctcttgaccagtat
gtgaacttcactgaacaacgcgaacaactacagagaagacgggctgaacttgatgctggt
gatgagaaaattagggaattgatatcagttttagaccagaggaaggatgaatcaattgaa
cgcacatttaaaggagttgcaaagcacttccgtgaagtgttcgctgaattagtgcaaggt
ggccacgggtacctggttatgatgaagaaaaaggatggtgatgctggcgatgaagacaat
gatgaggatggacctcgtgaaccagatcctgaagggagaatagagaagtatattggtgtg
aaagtcaaggtttccttcactggcaagggagaaactcagtccatgaaacaattgtctgga
ggacagaagacagtggtggcattaacgctgattttcgccatccaacgatgtgatccagct
ccattctacctgtttgatgagattgacgctgctctggatcctcagtacagaacggctgtt
ggaagcgtggtccgacgtctggctgattcggcagacacccagttcatagcgactacattc
aggccggagatcctgaaagtcgcggacaagatctatggtgtgacacacaagaacagagtg
agctacatcaatgtggtgtccaaggatcaggccatggacttcattgagcatgaccagacg
cacaatgccagctga
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integrated database retrieval system
