Lolium rigidum (rigid ryegrass): 124684897
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Entry
124684897 CDS
T09103
Name
(RefSeq) protein argonaute 1B-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124684897
03036 Chromosome and associated proteins [BR:
lrd03036
]
124684897
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
124684897
Chromosome and associated proteins [BR:
lrd03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
124684897
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
124684897
microRNA pathway
RISC loading complex
124684897
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
Gly-rich_Ago1
PAZ
ArgoL1
ArgoL2
ArgoMid
DUF2344
Motif
Other DBs
NCBI-GeneID:
124684897
NCBI-ProteinID:
XP_047075115
LinkDB
All DBs
Position
1:10175822..10183269
Genome browser
AA seq
1124 aa
AA seq
DB search
MVRKKKTGTGSAGESSGEASGATGQGSSQRPERAPQQPPQQQGGGRGWVPQQGGRGGGQH
VGRGGHYQGHGGPAAHRPGGPPEYQQRDYQGRGQQGGGPPEYQQRDYQGRGQQGGGPPQY
QQRDYQGRGHPGGGQPEYQPRDYQGQGRGGPRPRGRGMPEPYYGGHTGGSGGVSVPPGPS
RTVPELHQAPHVQYQAPVVSPSASGAGSSSQPVAEVSSGQLQQQFQSLAILDQSSTSQAV
RPPPASSKSVRFPLRPGKGTYGDRCVVKANHFFAELPDKDLHQYDVTISPEVTSRGVNRA
VIAELVKMYRQSHLDGRLPAYDGSKSLYTAGPLPFTSKTFEITLQDEEETLGGGQVAPRR
DRLFRVVIKFAARADLHHLAMFLAGRQPDAPQEALQVLDIVLRELPTARYSPVSRSFYSP
NLGKRQRLGDGLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIEFVAQLLCRDISV
RPLSDSDRVKIKKALRGIKVEVTHRGNMRRKYRISGLTSQATRELSFPVDEHGTVKTVVQ
YFVETYGFNIQHTTLPCLQVGNQQRPNYLPMEVCKIVEGQRYSKRLNEKQITALLKVTCQ
RPQEREKDIMQTVHQNAYYKDPYAQEFGIKIDEQLASVEARVLPPPRLKYHDSGREKDVL
PRVGQWNMMNKKMVNGGRVSHWTCINFSRSVQDNAARIFCHELAIMCQISGMNFAPEPVL
PPLTARPEHVERALKARYQDAMNIIRPQGRELDLLIVILPDNNGSLYGDLKRICETDLGL
VSQCCLTKHVFKMSKQYLANVALKINVKVGGRNTVLVDALSRRIPLVSDRPTIIFGADVT
HPHPGEDSSPSIAAVVASQDWPEITKYAGLVSAQAHRQELIQDLFKVWQDPQRGTVTGGM
VKELLISFKRATGQKPQRIIFYRDGVSEGQFYQVLLFELDAIRKACASLEPNYQPPVTFV
VVQKRHHTRLFANNHNDSRTVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPA
HYHVLWDENKFTADELQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSD
SGSVASGARGPPQGPARSTRAFGNVPVRPLPALKENVKRVMFYC
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atggttcgcaagaagaaaaccggcaccggcagtgctggagagagttccggggaggcttcg
ggagctaccggacagggttcctcacagcgacctgagagagctcctcaacagcctcctcag
caacaaggtggtgggcgtggctgggtacctcagcagggtggccgcggtggtgggcaacac
gtaggccgtggtggtcactatcagggtcatggagggccagctgcacaccgtccaggtggt
ccacctgaatatcaacagcgtgactatcagggacgtgggcaacaaggtggcggtccacct
gaatatcaacagcgtgactatcagggacgtggacagcaaggtggtggtccacctcaatat
caacagcgtgattatcaggggcgtggacatccaggtggtggtcagcctgaatatcaaccg
cgtgactatcagggtcagggacgtggtggtccacgccccagagggcgtggtatgccggag
ccatactatggcgggcatacgggagggagtggtggagtcagtgttccaccaggtccgtca
agaacagttcccgagctgcaccaagccccgcatgtccaatatcaagccccggtggtttca
ccatctgcatcgggtgctggctcatcctctcagcctgtggctgaggtgagcagtggacaa
ctccagcaacagtttcaaagccttgccatcctcgatcaaagttcgaccagccaagccgtt
cggccaccacctgcatcaagcaaatcagttagattcccgttgcgccccggaaagggtaca
tatggggataggtgtgtggtgaaagccaatcatttctttgctgagctccctgataaagac
ctccaccaatatgatgtgaccatatcgccagaagttacatcacgtggtgtcaatcgtgct
gtgattgcagagcttgtaaagatgtatagacaatctcatttggatggacgtctacctgcc
tatgatggaagtaagagcctttatacagctgggccattaccgtttacttcaaagacattt
gaaattactctgcaagacgaagaagagaccttgggtggtgggcaagtcgcgccaaggcgt
gatagactattcagggtggtgatcaaatttgccgctcgtgctgatctccaccatttggct
atgtttctagcagggaggcaaccagatgcacctcaagaagctcttcaggtgcttgacatt
gtgctgcgtgaattgcctactgccaggtattctccagttagtcgatcattttattctcct
aacttagggaaacgtcaaagacttggtgacggtttggaaagttggcgtggattttaccaa
agtataaggccaacacagatggggctttcactaaatatcgatatgtcttctactgcattt
atcgagcctctccctgtgattgagtttgttgctcagcttctgtgcagagacatctcagtt
agaccgttatctgattcagatcgtgtgaagattaaaaaagctctacgaggtataaaggtt
gaggttacacatcggggaaacatgcgtaggaagtaccgtatatctggcctcacttcacaa
gcaacaagagagctatcattccctgttgatgagcacggtactgtgaagactgtggtgcaa
tacttcgtggagacttatggttttaatattcagcacaccactttaccttgcttgcaagtg
ggcaatcagcaaagaccaaattatctcccgatggaggtttgtaagattgttgaaggacaa
cgctactcaaaacgtttgaatgagaaacaaataactgctctactgaaagtcacttgccag
cgccctcaagagcgtgagaaagacatcatgcagactgtgcatcaaaatgcatactacaag
gatccatatgcacaagaatttggcataaaaattgatgagcaacttgcatcagttgaagct
cgtgttctgcctccaccacggcttaagtaccatgatagtggcagagagaaggatgtcttg
cccagggtcggccaatggaatatgatgaacaagaaaatggtgaatggtggtagagtcagc
cactggacatgcattaacttctctcggagtgtgcaagataatgctgccaggattttctgt
catgagttggctataatgtgccaaatatctggaatgaactttgcaccagaacctgtgctt
cccccacttactgcaaggcctgaacacgtggaaagagcactaaaggcacgttatcaagat
gcaatgaacataattcgaccccagggcagagaacttgacctgctaattgttatactgcct
gacaataatggttctctttatggggatcttaagaggatttgcgagactgatcttggattg
gtatctcagtgttgtctaacaaaacatgtttttaagatgagcaagcagtatcttgcaaat
gtagctcttaaaatcaatgttaaggtggggggaaggaatactgtacttgtggatgctttg
tcaaggaggattccccttgttagtgacagaccaaccataatatttggtgctgatgttaca
catcctcaccctggagaagattccagcccttccattgcagctgtggttgcttctcaagac
tggcctgagatcactaagtatgcaggattagtgagcgcccaagcccataggcaagagttg
atacaggatctttttaaagtatggcaagatccccaaagaggaactgtgactggcggcatg
gtcaaggagctgctcatatctttcaagagggcaactggacagaaaccccagaggatcata
ttttatagggatggtgtcagtgaaggacagttctatcaagttctgttgtttgaacttgat
gccattcgaaaggcatgtgcttccctggagcccaattatcagcctccagttacttttgtt
gttgtccagaagcgccatcacactaggctctttgctaataaccacaacgattcacggact
gttgatagaagcgggaacatactgcctgggactgttgttgattcgaagatttgccatccg
acagaatttgatttctacttgtgtagccatgccggcattcagggaacaagccggcctgct
cattatcatgttctgtgggacgagaacaaatttactgctgacgagctgcaaactctcaca
aacaacttgtgctacacgtatgctaggtgcacccgctccgtatcaattgttcctccggca
tattatgctcatttggcagccttccgagctcgattctacatggagccggatacctctgac
agtgggtccgtggcgagcggtgcccgtggccctccacagggccctgcgcgcagcaccagg
gcgttcggaaatgttcctgtccggcctctccctgccctcaaggaaaacgtgaagcgtgtc
atgttctactgttaa
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