Lolium rigidum (rigid ryegrass): 124684900
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Entry
124684900 CDS
T09103
Name
(RefSeq) protein argonaute 1B-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124684900
03036 Chromosome and associated proteins [BR:
lrd03036
]
124684900
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
124684900
Chromosome and associated proteins [BR:
lrd03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
124684900
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
124684900
microRNA pathway
RISC loading complex
124684900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
Gly-rich_Ago1
PAZ
ArgoL1
ArgoL2
ArgoMid
DUF2344
Motif
Other DBs
NCBI-GeneID:
124684900
NCBI-ProteinID:
XP_047075118
LinkDB
All DBs
Position
1:10244255..10250605
Genome browser
AA seq
1120 aa
AA seq
DB search
MVRKKKTGGESSGEAPGATGQGSSQRPERAPQQPPQQQGGGRGWVPQQGGRGGGQHLGRG
GHYQGHGGPAAHRPGGPPEYQQRDYQGRGQQGGGPPEYQQRDYQGRGQQGGGPPRYQQRD
YQGRGHPGGGQPEYQPRDYQGQGRGGPRPRGRGMPEPYYGGHTGGSGGVSVPPGPSRTVP
ELHQAPHVQYQAPVVSPSASGAGSSSQPAAEVSSGQLQQQFQNLAILDQSSTSQAVRPPP
ASSKSVRFPLRPGKGTYGDRCVVKANHFFAELPDKDLHQYDVTISPEVTSRGVNRAVIAE
LVKMYRQSHLDGRLPAYDGSKSLYTAGPLPFTSKTFEITLQDEEETLGGGQVAPRRDRLF
RVVIKFAARADLHHLAMFLAGRQPDAPQEALQVLDIVLRELPTARYSPVSRSFYSPNLGK
RQRLGDGLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIEFVAQLLCRDISVRPLS
DSDRVKIKKALRGIKVEVTHRGNMRRKYRISGLTSQATRELSFPVDEHGTVKTVVQYFVE
TYGFNIQHTTLPCLQVGNQQRPNYLPMEVCKIVEGQRYSKRLNEKQITALLKVTCQRPQE
REKDIMQTVHQNAYYKDPYAQEFGIKIDEHLASVEARVLPPPRLKYHDSGREKDVLPRVG
QWNMMNKKMVNGGRVSHWTCINFSRSVQDNAARIFCHELAIMCQISGMNFAPEPVLPPLT
ARPEHVERALKARYQDAMNIIRPQGRELDLLIVILPDNNGSLYGDLKRICETDLGLVSQC
CLTKHVFKMSKQYLANVALKINVKVGGRNTVLVDALSRRIPLVSDRPTIIFGADVTHPHP
GEDSSPSIAAVVASQDWPEITKYAGLVSAQAHRQELIQDLFKVWQDPQRGTVTGGMVKEL
LISFKRATGQKPQRIIFYRDGVSEGQFYQVLLFELDAIRKACASLEPNYQPPVTFVVVQK
RHHTRLFANNHNDSRTVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHV
LWDENKFTADELQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSV
ASGARGPPQGPARSTRAFGNVPVRPLPALKENVKRVMFYC
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atggttaggaagaagaaaaccggtggagagagttctggggaggctccgggagctaccgga
cagggttcctcgcagcgacctgagagagctcctcaacagcctcctcagcaacaaggcggt
ggccgtggttgggtgcctcaacagggtggccgcggtggtgggcaacacctaggccgtggt
ggtcactatcagggtcacggagggccagcggcacaccgtccaggtggtccgcctgaatat
caacagcgtgactatcagggacgtgggcaacaaggtggcggtccacctgaatatcaacag
cgtgactatcagggacgtggacagcaaggtggtggtccacctcgatatcaacaacgtgac
tatcaggggcgtggacatccaggtggtggtcaacctgaatatcaaccgcgtgactatcag
ggtcagggacgtggtggtccacgccccagagggcgtggtatgccggagccatactatggc
gggcatacgggagggagtggtggagtcagtgttccaccaggtccgtcaagaacagttccc
gagctgcaccaagccccgcatgtccaatatcaagccccggtggtttcaccatccgcatcg
ggtgctggctcatcctctcagcctgcggctgaggtgagcagtggacaactccagcaacag
tttcaaaaccttgccatcctcgatcaaagttcgaccagtcaagctgtccgtccgccacca
gcatcaagcaaatcagttagattcccgttgcgccccggaaagggtacatacggggatagg
tgtgtggtgaaagccaatcatttctttgctgagctccctgataaggacctccaccaatac
gatgtgaccatatcgccagaagttacatcacgtggtgtcaatcgtgctgtgatagcagag
cttgtaaagatgtatagacaatctcatttggatggacgtctacctgcctatgatggaagt
aagagcctttatacagctgggccattaccgtttacttcaaagacatttgaaattactctg
caagacgaagaagagaccttgggtggtgggcaagtcgcgccaaggcgtgatagactattc
agggtggtgatcaaatttgccgctcgtgctgatctccaccatttggctatgtttctagct
gggaggcaaccagatgcacctcaagaggctcttcaggtccttgacatcgtgctgcgggaa
ttgcctactgccaggtattctccagttagtcgatcattttattctcctaacttagggaaa
cgtcagagacttggtgacggtttggaaagttggcgtggattttaccaaagtataaggcca
acacagatggggctttcactaaatattgatatgtcttcgactgcatttatcgagcctctc
cctgtgattgagtttgttgctcagcttctgtgcagagacatctcagttagaccgttatct
gattcagatcgtgtgaagataaaaaaagctctacgaggcataaaggttgaggttacacat
cgaggaaacatgcgtaggaagtaccgtatatctggcctcacttcacaagcaacaagagag
ctatcattccctgttgatgagcacggtactgtgaagactgtggtgcaatacttcgtggag
acttatggttttaatattcagcacaccactttaccttgcttgcaagtgggcaatcagcaa
agaccaaattatctccctatggaggtttgtaagattgttgaaggacagcgctactcaaaa
cgtttgaatgagaaacaaataactgctctactgaaagtcacttgccagcgccctcaagag
cgtgagaaagacatcatgcagactgtgcatcaaaatgcatactacaaggatccatatgca
caggaatttggcataaaaattgatgagcatcttgcatcagttgaagctcgtgttctgcct
ccaccacggcttaagtaccatgatagtggcagagagaaggatgtcttgcccagggtcggc
caatggaatatgatgaacaagaaaatggtgaatggtggtagagtcagccactggacatgc
attaacttctctcggagtgttcaagataatgctgccaggattttctgtcatgagttggct
ataatgtgccaaatatctggaatgaactttgcaccagaacctgtgcttcccccacttact
gcaaggcctgaacacgtggaaagagcactaaaggcacgctatcaagatgcaatgaacata
attagaccccagggcagagaacttgacctgctaattgttatactgcctgacaataatggt
tctctttatggggatcttaagaggatttgcgagactgatcttggattggtatctcagtgt
tgtctaacaaaacatgttttcaagatgagcaagcagtatcttgcaaatgtagctcttaaa
atcaatgttaaggtggggggaaggaatactgtacttgtggatgctttgtcaaggaggatt
ccccttgttagtgacagaccaaccataatatttggtgctgatgttacacatcctcaccct
ggagaagattccagcccttccattgcagctgtggttgcttctcaagactggcctgagatc
actaagtatgcaggattagtgagcgcccaagcccataggcaagagttgatacaggatctt
tttaaagtatggcaagatccccaaagaggaactgtgactggcggcatggtcaaggagctt
ctcatatctttcaagagggcaactggacagaaaccccagaggatcatattttacagggat
ggtgtcagtgagggacagttctatcaagttctgttgtttgaacttgatgccattcgaaag
gcctgtgcgtccttggagcccaattatcagcctccagttacttttgttgttgtccagaag
cgccatcacactaggctctttgctaataaccacaacgattcacgaactgttgatagaagc
gggaacatactgcctgggactgttgttgattcgaagatttgccatccgacagaatttgat
ttctacttgtgtagccatgctggcattcagggaacaagccggcctgctcattatcatgtt
ctgtgggacgagaacaaatttactgctgacgagctgcaaactctcacaaacaacttgtgc
tacacgtatgctaggtgcacccgctccgtgtcaattgttcctccggcatattatgctcat
ttggcagccttccgagctcgattctacatggagccggatacctctgacagtgggtccgtg
gcgagcggtgcccgtggccctccacagggccctgcgcgcagcaccagggcgttcggaaat
gttcctgtccggcctctccctgccctcaaggaaaacgtgaagcgcgtcatgttctactgt
taa
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