Lolium rigidum (rigid ryegrass): 124684903
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Entry
124684903 CDS
T09103
Name
(RefSeq) ruBisCO large subunit-binding protein subunit beta, chloroplastic
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124684903
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124684903
03110 Chaperones and folding catalysts [BR:
lrd03110
]
124684903
03029 Mitochondrial biogenesis [BR:
lrd03029
]
124684903
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lrd04147
]
124684903
Enzymes [BR:
lrd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
124684903
Messenger RNA biogenesis [BR:
lrd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
124684903
Chaperones and folding catalysts [BR:
lrd03110
]
Heat shock proteins
HSP60 / Chaperonin
124684903
Mitochondrial biogenesis [BR:
lrd03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
124684903
Exosome [BR:
lrd04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124684903
Exosomal proteins of other body fluids (saliva and urine)
124684903
Exosomal proteins of breast cancer cells
124684903
Exosomal proteins of colorectal cancer cells
124684903
Exosomal proteins of bladder cancer cells
124684903
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
124684903
NCBI-ProteinID:
XP_047075121
LinkDB
All DBs
Position
1:complement(10432943..10438877)
Genome browser
AA seq
598 aa
AA seq
DB search
MASPFGATSTAGLMAAPTGIVSDKKPFSVSSISLASRPRNARPQRRCSFRVKAAKELYFN
KDGSATKKLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVE
NIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVIAAGANPVQITRGIEKTAKAL
VEELKKMSKEVEDSELADVAAVSAGNNYEIGNMIAEAMSKVGRKGVVTLEEGRSSENNLY
VVEGMQFERGYISPYFVTDSEKMTTEYENCKLLLVDKKITNARDLINVLEEAIRGQYPIL
IIAEDIEQEALATLVVNKLRGSLKICAIKAPGFGERKTQYLDDIAILTGGTVIRDEVGLS
LDKADKSVLGTAAKVVLTKESTTIVGDGSTQEEVSKRVAQIKNLIEAAEQDYEKEKLNER
IAKLAGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLAAKVDA
IKETLENDEQKVGAEIVRRALCYPLKLIAKNAGVNGSVVTEKVLSNDNTKFGYNAATGQY
EDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDVVVVEIKEAEPAPLANPMDNSGYGY
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaccattcggtgctacttctactgctgggctcatggcagctccaactggcatt
gtatcggacaagaagccattctcagtatcatctatctcccttgccagccggccacggaat
gcgcgtcctcagaggagatgcagcttcagagtaaaagcagctaaggagctttacttcaac
aaggatggctcagccaccaagaagctacaggctggagtcaataagcttgcggatcttgtt
ggagttacattgggaccaaaaggaaggaatgttgttttggagagcaagtatgggtcccct
aggattgtcaatgatggtgttacagttgcaagagaggttgagctggaggaccctgttgaa
aatattggagctaagttggttaggcaagccgcagcgaagaccaatgatttagctggtgat
gggacaactacttctgtggtccttgctcagggtctcattgctgagggtgttaaggttatt
gcagctggtgctaatcctgtacaaattactcgtggtatcgagaaaacagcgaaagcactt
gttgaggaactaaagaaaatgtcaaaggaggttgaagatagtgagcttgcagatgttgct
gcagttagtgctggcaacaactacgaaattggtaacatgatagctgaggctatgagcaag
gttggccggaagggtgttgttaccctcgaagaagggagaagttccgagaacaatctctat
gttgtggagggaatgcagtttgagcgtggttatatctctccttattttgtgactgacagt
gagaagatgaccacagagtacgagaactgcaagctccttttggtggacaaaaagatcacc
aacgcgagggatcttatcaatgttctggaggaagccattaggggtcagtacccaattctg
ataattgctgaggatattgagcaggaggctcttgcgacccttgttgtcaacaagcttaga
ggatctttgaaaatctgtgctatcaaggcacctgggtttggagagcgcaagacccagtac
ctggatgatattgccatcttgactggaggaactgtaatcagagacgaggtgggcctgtca
cttgacaaggcagacaaatcagttctaggaacggcagcgaaggttgtccttaccaaagag
tcgacaaccatagttggtgatggcagcacccaggaagaagtgtcgaagagggttgcacag
atcaaaaatctcattgaggcagcggaacaagattacgaaaaggaaaagctcaatgagagg
atagcaaagcttgctggtggtgttgctgtcattcaggtgggagcacaaacagaaaccgaa
cttaaagagaaaaagttgagagttgaggatgctctgaatgcgactaaggctgccgttgag
gaaggtattgttgttggtggagggtgcactcttttgagactggctgctaaagttgatgcc
atcaaggagaccttggagaatgatgaacagaaggtcggtgctgaaatagtgaggagggca
ttgtgctacccacttaaattgatcgccaagaatgccggtgtcaatggcagtgttgtcact
gagaaggttctttctaacgacaacaccaagttcggctacaatgctgctactgggcagtat
gaggacttgatggctgctggtatcattgaccccactaaggtggtgagatgttgcctggag
catgctgcgtcggtggccaagaccttcctgacatcggacgttgttgtcgttgagatcaag
gaagctgagcccgcgcccctcgctaacccaatggacaactccggctacgggtactga
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