Lolium rigidum (rigid ryegrass): 124684942
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Entry
124684942 CDS
T09103
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2-like
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124684942
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lrd03041
]
124684942
Spliceosome [BR:
lrd03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
124684942
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
Motif
Other DBs
NCBI-GeneID:
124684942
NCBI-ProteinID:
XP_047075155
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All DBs
Position
1:complement(13232717..13236921)
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AA seq
553 aa
AA seq
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MGADDQPFPARKREREEEPADGDAAEKRPRADESEGASLLGLANYTDEEEEGGAANTGHA
NGAPREEEVEDGGIEEEDGVEEEDEDERRAPERRPRQIELRRDCPYLDTVNRQVLDFDFE
KFCSISLSNLNVYACLVCGKYYQGRGLKSHAYTHSLEAGHHVFINLQTEKVYCLPDGYEI
NDPSLEDIRHVLNPRFAREQVLNLDKNKQWSRALDGSNYLPGMVGLNNIKETDFVNVTIQ
SLMRITPLRNFFLIPENYQHSKSPLVHRFGELTRKVWHARNFKGQVSPHEFLQAVMKASE
KRFQIGVQSDPVEFMSWLLNTLHAKLRSSKKKNRSIIYDCFQGELEVVKEMHRKHIVGDE
QNGDAVSQVETSDGMVTETSRVPFLMLGLDLPPPPLFKDAMEKNIIPQVPLFNILKKFDG
EAVTEVVRPSIARMRYRVIRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYIP
LPKPKGNEKLRSKYDLIANIVHDGKPGEGCYRVFVQRKSEEAWYEMQDLHVTETLPQMVA
LSEAYMQIYEQHE
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcggacgaccagccgttcccggcgcggaagcgcgagcgcgaggaggagccggcc
gacggggacgcggccgagaagcgcccgcgcgcggacgaatcggagggcgcctcgctgctg
gggctcgccaactacacggacgaggaggaggaaggcggggccgcgaacacggggcacgcg
aacggcgccccccgcgaggaggaagtggaggatggtgggattgaggaagaggatggggta
gaggaagaggacgaggacgagaggagggctccggagaggaggccgaggcagatcgagctg
cggcgggactgcccttacctcgacaccgtgaatcgacaggtccttgactttgactttgag
aagttctgctcaatctccttatcaaatttgaatgtgtatgcatgcctagtttgtggaaag
tattaccaaggaagaggcttgaaatcgcatgcgtatacccacagccttgaggcaggtcac
catgtgttcattaaccttcaaactgagaaagtttactgtctccctgatgggtacgagata
aatgatccgtcactagaagatattcgacatgttctcaatccaaggttcgcaagagagcag
gttctgaatcttgacaagaacaagcagtggtcaagagctctggatggctccaattatcta
cctggaatggttggtcttaacaacattaaggagactgactttgtgaatgtcacaatacag
tcattaatgagaataactcctttgagaaatttctttctcatacctgaaaattatcagcat
agcaaatccccactggttcatcggtttggagaattaactcgcaaggtttggcatgctagg
aacttcaagggccaagttagtccacatgagttccttcaagcagttatgaaggccagtgag
aagagatttcagattggtgtacaatctgatccagttgaatttatgtcatggctcttgaac
acactgcacgcgaaactgagaagttcgaagaagaaaaataggagcatcatctatgattgc
tttcagggggaacttgaagttgtcaaggaaatgcacaggaagcatatagtgggtgatgag
cagaatggtgatgcagtctcacaggttgaaacaagtgacggtatggtcactgaaacgtct
agggtcccatttttgatgctcggtcttgacctgccacctccaccccttttcaaagatgcc
atggagaaaaatattattccacaggtaccactgtttaatatactgaagaagtttgatggc
gaggcagttacagaggtggtgaggccatctattgctcggatgaggtaccgagtcatccgg
cttccaaagtatatgatccttcacatgcgacggttcaccaaaaacaacttctttgtggag
aaaaacccaactcttgttaacttccctgtgaagaacttggaactgaaggattacatccca
ctacctaagccaaaagggaatgagaagctgcgttcaaagtacgatctcatagccaacatc
gtacacgacggcaagccgggcgaaggatgctacagagtgtttgtgcagcggaaatcagaa
gaggcatggtacgagatgcaggatctccatgtcaccgagaccctccctcagatggtagct
ctctcggaagcctacatgcagatatacgagcagcacgaatga
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