Lolium rigidum (rigid ryegrass): 124684979
Help
Entry
124684979 CDS
T09103
Name
(RefSeq) U-box domain-containing protein 12
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
124684979
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lrd04121
]
124684979
Enzymes [BR:
lrd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124684979
Ubiquitin system [BR:
lrd04121
]
Ubiquitin ligases (E3)
U-box type E3
124684979
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Arm
PUB10_N
U-box
ARM_PUB
ARM_ARMC5
HEAT_2
zf-RING_UBOX
zf-C3HC4_4
HEAT_EZ
zf-Nse
Arm_2
ARMC9_ARM
zf-C3HC4_2
WRM1_C
zf-C3HC4
Insc_C
KAP
zf-RING_2
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
124684979
NCBI-ProteinID:
XP_047075202
LinkDB
All DBs
Position
1:15321599..15327530
Genome browser
AA seq
610 aa
AA seq
DB search
MAAATVAAEIAALPEPRGPLRRLCGDLARRVRLLAPLLDDPSSAPAPASSTPLADALRAA
RDLLHSVNHGSKIYQATRGRDGLLRDFAAVNRQIQEALDQLPYHAFDMPEEVQEQVALVH
SQFKRAAARATADPPDAQLARDLAWALAGDKPCFPALLGRVSEKLQLETMADMKKESVAL
HDMVISSGGEPDGCVEEMSSLLKRLKDCVITQEPASEALAGGRSSSIKHRSPIIPDEFRC
PISLELMQDPVIVSSGQTYERSCIQKWLDSGHKTCPKMQLPLTHTSLTPNFVLKSLIAQW
CEANGIELPKNKANFHDKKVVKSSDYDNAGLVSLMSRLRSVNQDEQRAAAGEIRLLAKRN
VNNRICIAEAGAIPLLVNLLSSSDPRTQEHAVTALLNLSIHENNKAGIVDSNAIPKIVEV
LKTGSMEARENAAATLFSLSVVDENKVTIGAAGAIPPLINLLCDGSPRGKKDAATAIFNL
CIYQGNKVRAVKAGIIVHLMNFLVDPTGGMIDEALTLLAILAGNPDGKAVITQSEPMPPL
VEVIRTGSPRNRENAAAILWSLCSADAEQIMAAKAAGGEDALKELSETGTDRAKRKASSI
LELMRQKEEA
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgcgacggtggccgccgagatcgccgcgctcccggagccgcggggccccctg
cgccgtctctgcggagacctcgcgcgccgtgtccgcctcctcgccccgcttctcgacgac
ccgtcctccgcgcccgcgcccgcttcctcgacccctctcgccgacgccctccgcgccgcg
cgcgacctcctccactccgtcaaccacggcagcaagatctaccaggccacgcgaggccgg
gacggtctcctccgcgacttcgccgccgtcaacaggcagatccaggaggcgctagaccag
cttccctaccacgccttcgacatgcccgaggaggtgcaggagcaggtcgcgctcgtgcac
tcccagttcaagagggccgccgcgagggccacggcggacccgccggacgcgcagctcgcc
agggacctggcctgggcgctcgccggcgacaagccctgtttccccgcgctcctggggagg
gtctcggagaagctgcagctggagaccatggcggacatgaagaaagagtccgtggctttg
cacgacatggtcatttccagcgggggcgaaccggatgggtgcgtcgaggagatgtcgtcc
ttactcaagaggctcaaggactgcgtgatcactcaagagcccgcgtccgaggctctcgcc
ggcggcaggtcttcctctataaagcataggtctcccatcatcccggacgaattcagatgc
cccatttcgctcgagctcatgcaagaccccgtcatcgtctctagcggccagacgtacgaa
cgatcctgcatccagaagtggcttgattccggacacaagacctgccctaagatgcagctg
cccctcacacatacttccctcaccccaaactttgtcctcaaaagcctgattgcgcagtgg
tgtgaagccaacggtatcgagcttcccaagaacaaagccaacttccatgacaagaaagtg
gtcaaaagttcagactatgacaatgctggtctggtctcgctgatgagtaggctgcgcagt
gtgaaccaggacgagcagcgggcagctgcaggggagatccggttgctcgcaaagagaaat
gtgaacaaccgcatatgcattgctgaagcgggagcgattcccttgctcgtcaatctgctc
tcctcttccgatccaagaacgcaagaacatgctgtcacggcactccttaatctctccatc
cacgagaataacaaggcaggcatcgtggactccaatgctatccctaagatagtggaagtg
ctgaaaaccgggagtatggaagccagagagaatgcagcagccacactatttagcctgtca
gttgtggatgagaacaaagtaactattggcgccgctggtgcgatacctccactcatcaat
cttctgtgtgatggcagcccaagaggcaagaaagatgcagcaacggcaatttttaatctg
tgcatataccagggcaataaggtccgggcggtgaaagctggaatcatcgtccatctcatg
aacttcctggtggatcctaccgggggaatgattgatgaggcactcactcttttggcaatt
cttgccggtaacccagatggcaaggctgtaatcacgcaatcagagccaatgcccccactt
gttgaggtcatccgaactgggtctcctcgcaatagggagaatgctgcagccattctatgg
tctctttgttctgctgatgctgagcaaatcatggctgcaaaggcagctggaggggaagat
gcactgaaggaactgtcagaaactggcacagatcgtgcaaaaaggaaagcttctagcatc
cttgaactcatgcgccaaaaggaagaggcgtga
DBGET
integrated database retrieval system
