Lolium rigidum (rigid ryegrass): 124685022
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Entry
124685022 CDS
T09103
Name
(RefSeq) probable protein transport Sec1b
KO
K15292
syntaxin-binding protein 1
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrd04131
]
124685022
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lrd04147
]
124685022
Membrane trafficking [BR:
lrd04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
124685022
SNARE
SNARE associated proteins
Syntaxin-binding proteins
124685022
Exosome [BR:
lrd04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
124685022
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
Motif
Other DBs
NCBI-GeneID:
124685022
NCBI-ProteinID:
XP_047075251
LinkDB
All DBs
Position
1:complement(19980627..19988734)
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AA seq
652 aa
AA seq
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MSMSGAEFSGVGEDPRIFRNVCRDRILKDMLKPDKDKENKSAWKVLIMDKFTVKIIGYAC
KMAEITDAGISLVEDLFKRREPMPSMDAIYFLQPLKENVIMLLSDMSGRCPLYRKAYIFF
SSPIPKDLVTYIKNDMSVIPRIGALREMNLEFFAIDMQGFVTDHDMALTELYSANGHNSK
NFNDTISTMAVRIATTFASLKEFPCVRYRAPKSADPSTAPKFDMVPKWLANAVWEIVSKY
KSTIPEFPQKETCELLILDRPIDQIAPVIHEWIYDAMCHDLLEMDGNKYIYEVSKGGSDP
EKKEALLEDQDPLWIELRHTHIADASERLYEKMNTFVSKNKAAQLSRDGGEVSTTDLQKI
VQALPQYSEQVEKLTLHIEIAGKINKFIREYGLRDIGQVEQDLVFGDAGAKEVINLLRSK
QNMSQENKLRLLIIYAIVCPDKFEGDKGDKLMQLAKLPSDDMKVIKSLQYLVGSDAKKSG
RAGGFSLKFDAQKKKNTGVRTERQDGEEGWALSRFFPLIEELIEKLSKGELPLNEYPSLS
EPSSTAQSASAGKPAQNPQPMSRRSRRTPQYAKSRNSDDGQSSDSAVLRHASGDFKRLGN
RIFVFMVGGATRSELRTAHTLTMKLKREIVLGSSSIDDPPQFISKLKSLGPS
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgtcgggggcggaattcagcggcgtgggcgaggaccccaggatcttccgcaac
gtctgccgcgaccggatactcaaggacatgctgaagccggacaaagacaaggagaacaag
agcgcatggaaggttcttatcatggataaatttaccgtaaagatcattggttatgcttgc
aagatggcggaaattacggatgcagggatttcgttggtagaagatctattcaagcgaagg
gagcccatgccttcaatggatgccatctactttctacagccactgaaagaaaatgtcata
atgcttctatccgacatgtctgggagatgtccgctgtataggaaggcatacatcttcttc
agttcaccaattcccaaggacctggtgacttacattaagaacgacatgagtgtgatacca
cgcattggtgcactaagagagatgaatttggagttttttgctatcgacatgcaggggttt
gtaactgaccatgatatggcgctgactgaactatatagtgcaaatgggcataattcgaaa
aacttcaacgacaccataagcactatggctgttcgcatagctaccacatttgcatcattg
aaggaatttccatgtgtgcggtatcgtgcaccaaagagtgcagacccatcaacagcacca
aaatttgacatggttccaaaatggctagctaatgctgtttgggaaattgtttccaaatat
aagtcaacaattcctgaatttccccagaaggagacatgtgaactgctcattctggacagg
cctatagatcagatagcacctgttattcacgaatggatctatgatgcaatgtgccatgat
ctactcgagatggatggcaacaaatacatatatgaggtgtcaaaagggggatcagatcct
gaaaagaaggaggctttgttggaggatcaagatcctctctggatagagcttcgccatact
cacattgctgatgccagtgagaggttgtatgagaagatgaatacctttgtctcaaagaat
aaagcagcacaactttcaagagatggtggtgaagtctcaaccacggatctgcagaagatt
gttcaagctttgccacaatacagtgagcaagttgagaaattgaccctccatatagagatt
gctggaaaaattaacaagttcatcagggagtacgggctccgcgacattgggcaggtggag
caggatctagtttttggagatgcaggagccaaggaggtgatcaatctcctcaggtcaaag
cagaatatgagtcaagaaaacaaattgagattgctgattatatatgcaattgtatgtcct
gacaagtttgaaggtgacaaaggggacaagttgatgcagctagcaaaactgccatccgat
gatatgaaggtaataaaaagcttacaatacttggttggttcagatgcaaaaaagtccgga
cgggctggcggtttctctctcaaatttgacgcacaaaagaagaaaaacactggcgttagg
acagaacgacaggatggtgaggaaggctgggcattatcacgttttttcccacttatagag
gagctgatcgagaagctgagcaaaggtgaattaccgttaaacgaatacccatctttaagt
gaaccaagttctactgctcaaagtgcgtcggcgggaaaaccagcacaaaatccacaaccc
atgtctaggagatcacggcggacaccgcaatatgctaagtctcgtaactctgacgatggt
caatcaagtgactctgcggtcttgagacacgcatcaggtgacttcaagaggctaggcaac
cggatttttgtcttcatggttggcggagcaactcggtcagaactacggacagcgcacacg
ctaactatgaagttgaagagagaaatcgtcctggggtcttctagcattgatgaccctcca
cagtttatctcgaagctgaagtcgcttggaccatcttag
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