Lolium rigidum (rigid ryegrass): 124685115
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Entry
124685115 CDS
T09103
Name
(RefSeq) fanconi-associated nuclease 1 homolog
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
124685115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lrd03400
]
124685115
Enzymes [BR:
lrd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
124685115
DNA repair and recombination proteins [BR:
lrd03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
124685115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VRR_NUC
FAN1_TPR
FAN1_HTH
HIRAN
SPOR
Sgf11
Motif
Other DBs
NCBI-GeneID:
124685115
NCBI-ProteinID:
XP_047075390
LinkDB
All DBs
Position
1:26784330..26792085
Genome browser
AA seq
974 aa
AA seq
DB search
MLKGRESLVRLIGRRRRSPLPASLAAALLSSPAPSHQADDADADADAGASASEAADAGPS
SGGGASAGAERVACPVCGESIRGSDYNVNAHLDICLTRGAKRKLTQSSLLDFRFSKKATV
KPNPDSVDNDDEAGNKGLAGGDVSSDTAFLSRNSSSDPGSPEDSATPSLTACPRGSPDIS
EMHDTCIPSNVVLPNTKNAENDGAVEKDSSYMLSAGTTSGSIDACPDVGSSTKVVVDTVI
VGRRFRENIELQEGVGITVLRDPQNAKDPDAIKVLYAGSECEQMLGYLPRELAKVLAPLL
DKHFVECEGVVVGLPEQQLDNVPIHLTCQKCEDDNEGYEDLRYRQSLWENFLGVVRNGNL
QRPSSARYQENFNTMLTDVMTNHTHLFSDKETSFLGSFKSLSNDGQRLFVRIYSRKGPWF
RVRSISYREISDVDHAAMELKLAGYIEMLSCTDVPSEYDIKEILDVLSVPEMKEMLKELP
KENTNCTRRHEILSTLLSIYNNGTCTTLPKRIVKWTGTCIKTSNMADELLWRVQRLFFLN
GDQDLSSFLLVDLGLVKFPDYTCSISHCIFQERNDLLEYEEAIRVAQFMDESLDNDNMEM
VSRCADLSENRLCTMFKDKDSSFAESPPSFYSCFSPTWIYSKVLTLGVSVYERERRYADA
IRTLKILLSNVSSGRRRGYWTLRLSVDLEHMGRPNESLSTAEGGVVDPWVRAGSKIALQK
RVLRLGKPPRCWKVPSYADSLRRNIKEVNIEGRPLNCEIGAKNVFYGYDGERCGVEQLAL
QYYADEGGGWQGTHSEGGIWMTIFGLLMWDVIFSEVCDVFHSKFQTAPLDFETDDFYKSR
KDLIETQLEKIQDGMAEEMLISSWELHQGTSCKGVNWDRHSMADLRAVVACVGGHRLALL
LRHLALDYRSWSGGMPDLLLWRFLDERGGAEAKLAEVKGPKDQLSEQQRAWIFVLMDFGF
DVEVCKVSLVSKRR
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaggggcgcgagagcctggtccgcctcatcggccggcgtcgccgctcccctctc
cccgcctccctcgccgccgccctcctctcctcccccgctccctcccaccaggccgacgac
gcggacgcggacgcggacgcgggcgcgagcgcgagcgaggcggctgatgctggcccgtcg
tcgggagggggcgccagcgccggcgcggagcgggtggcctgccccgtctgcggcgagtcc
atccgcggctccgactacaacgtcaacgcccacctcgatatatgcctcacaagaggagcg
aaacggaagctaacacagagcagccttctggatttcagattcagtaaaaaagcaacagtt
aagcctaatccagacagtgtggacaatgatgacgaggcaggaaataagggactggcaggt
ggagacgtatctagtgacaccgcatttttatccaggaatagtagtagtgaccctggaagc
cccgaggatagtgctaccccttcattaactgcctgcccgcgtggttcacctgacatttcc
gagatgcatgatacatgtataccttcaaatgttgtcttgcccaatacgaagaatgctgaa
aatgacggcgcagtcgaaaaggactcttcctacatgctttcagcaggaacaacttctggc
agtattgatgcatgcccagatgtgggttctagcaccaaggttgttgttgacactgtcata
gtgggccggaggttccgtgaaaacattgaactgcaagaaggtgtgggcattactgttttg
agagatcctcagaatgctaaggatcctgatgctatcaaggtgctttatgcagggtctgaa
tgtgagcagatgcttggatacttgccccgagagctggctaaagtcttggctcctctactg
gacaaacactttgttgagtgcgagggagttgtggttggtttgcctgaacagcagcttgac
aatgtgcctatccatctaacttgccagaaatgtgaagatgacaatgagggatatgaagat
ctgagataccgacaatccttgtgggaaaattttcttggtgttgttagaaatggaaattta
cagcgacctagcagtgcaagataccaggaaaattttaataccatgctaacggatgttatg
accaaccatacacaccttttcagtgataaggaaacatcatttctaggttcttttaagtct
ctatcgaatgatggccaaaggctttttgtgaggatttacagtcgaaaagggccgtggttt
cgagtgaggagtatctcgtatcgtgaaatatcagatgtggaccatgcagccatggagtta
aagttggcaggttatatagagatgctttcttgcaccgatgttccatctgaatacgatatt
aaagagattctcgatgtgctaagtgttccagaaatgaaggaaatgctaaaggaactccct
aaggagaacacaaactgcactcgtcgacatgagattctcagcactcttctctctatatac
aataatggaacctgcacaactctaccaaagcgaattgtgaaatggacgggaacctgtata
aaaacctccaatatggctgatgaacttctgtggcgtgttcagaggctcttttttctaaat
ggtgatcaagatctttcatcatttctattagtggatcttggtctggtgaaattcccagac
tacacgtgcagcatctctcattgtatttttcaagaaagaaatgatttactggagtatgaa
gaggctattcgagtggcacagttcatggatgaatctcttgataatgataacatggaaatg
gtgtcaagatgcgccgatttgtctgagaatcgactatgcactatgtttaaagacaaagat
agcagttttgctgaatctcctccatcattctattcatgcttttcaccaacctggatctat
tcaaaagtactcacattaggtgtctctgtttacgaacgcgaacgcaggtatgcagatgca
ataaggactctaaagatactactcagtaacgtttcttctggtagacggcgaggatattgg
actctgaggctatctgttgatttggagcatatgggccgcccaaatgagagcctttcaaca
gctgaaggaggagtagttgatccatgggtccgtgctgggtcaaagattgcactccaaaag
agagttctgcgtttaggcaaacctccacgatgctggaaagttcctagttatgctgattct
cttaggagaaatataaaagaggtaaacatcgaaggaaggccattgaattgtgaaatagga
gcaaagaatgttttttatggctatgatggggaacgctgtggggtagagcagttagctttg
caatattatgctgatgaaggaggtggttggcaaggtacccattcagaaggtgggatatgg
atgacaatctttggccttctgatgtgggatgtaatattttcagaagtatgcgatgttttc
cactctaaatttcagacagcccctcttgattttgaaacagatgacttctacaagtcaaga
aaggaccttatagaaacacagttggaaaagatacaggacggaatggcggaagagatgctt
atcagctcatgggaactacatcaagggacatcctgcaagggtgtcaactgggaccggcat
tctatggcagacctacgagctgtcgttgcgtgtgttggcggccatcgcttagcgttgctg
ctccggcatctagcccttgattataggagttggtctggtggaatgcctgatttgctgcta
tggcgtttcctcgatgaacgaggtggtgctgaagctaaacttgcggaggttaaaggacca
aaggatcagctctctgagcagcaacgtgcttggatttttgtcctgatggattttggattt
gatgtggaggtttgcaaagtgagcttagtttctaagcggagatag
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