Lolium rigidum (rigid ryegrass): 124685298
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Entry
124685298 CDS
T09103
Name
(RefSeq) serine/arginine-rich splicing factor SR45a-like isoform X1
KO
K12897
transformer-2 protein
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124685298
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lrd01009
]
124685298
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lrd03041
]
124685298
Protein phosphatases and associated proteins [BR:
lrd01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124685298
Spliceosome [BR:
lrd03041
]
Common components
Common spliceosomal components
SR proteins
124685298
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_11
RRM_5
Motif
Other DBs
NCBI-GeneID:
124685298
NCBI-ProteinID:
XP_047075589
LinkDB
All DBs
Position
1:47919114..47923296
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AA seq
249 aa
AA seq
DB search
MSQCNEVRYTARSITPPAADRDSASPPPKRRALSKSPPLPPPPPFPPKGAVRILSSRSPS
RRRNSASRSPLPKRRGRSRSPSPKRRGRSRSPSPKRRGRSRSRSRSRNKSRSRSRDDLRN
PGNNLYVTGLSTRTSSSDLEKFFSKEGKVLDCHIVVDPRSKEPRGFAFVTMEKVEDARRC
IKHLHRSVLEGRLISVAKAKRTRERTPTPGEYCGPRGGRARSSPRRSSRGSRDRSRSPGG
GRDRDRKRD
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagtgcaatgaagtaaggtacacggcgcgctccatcacgcccccggcggcggac
agggacagcgcgtcgccccctcccaagaggcgcgccttgtccaagtcgccgccgctccct
ccccctcctcccttcccacccaaaggggcggtacgcatcctctcctcgaggtcgccttct
agaaggcgcaacagtgcctcaaggtctcccctgcctaagaggcgtggcagatcaaggtct
ccttcccccaagaggcgtggcaggtcaaggtctccttcccccaagaggcgtggcaggtca
aggtccaggtccaggtccaggaacaagagccgctccaggagtagagatgatctaaggaat
cccgggaacaacctgtacgtcacgggcctgtccacacgcacatcaagttcggacctggag
aagttcttcagcaaggagggaaaggttttagactgccatatcgttgtcgatcctcgctcc
aaggaaccgcgtggctttgcgtttgtgacaatggagaaggtggaggatgcgaggcgttgc
atcaagcacctacatcgttctgtgcttgaaggtcgcctcatcagcgtggcaaaggcaaag
agaacccgcgagaggacacctactcctggagaatactgtggtccaagaggcgggcgtgct
cgatcttcacctcgccgatccagcaggggttcgagggaccgctcgaggtcgcctggtgga
ggaagggacagagacaggaagcgcgactaa
DBGET
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