Lolium rigidum (rigid ryegrass): 124685835
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Entry
124685835 CDS
T09103
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1-like isoform X1
KO
K13103
tuftelin-interacting protein 11
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lrd03041
]
124685835
Spliceosome [BR:
lrd03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
124685835
Other components
Complex C specific factors
124685835
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
GCFC
Motif
Other DBs
NCBI-GeneID:
124685835
NCBI-ProteinID:
XP_047075825
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Position
2:424685..427009
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AA seq
526 aa
AA seq
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MDLDEDLPMPELQYNLQVLVDQAAAGIRGLDEQLQREKEDVASLTREKNRLAEHEASHGH
ELQVMEAITGALEQVRADEAAGVLTPEALLDTFRELKTRHEEVFDLCGLAWIACEFVRPL
LVRACHGWQPLRDPSFGLELMTQWKDFLQQHPQHYDFRSDYIDPYTQLLLDVILPVVRAS
GANSWDARDPEPMLRFLESWEELLPPVVLESTLEDVIMPKLSAAIDSWDRENVPIHAWVH
PWLPILGQSRTETLCHSVRYKLSTGVLCSWQSHDASAYAALSPWKGVFDPASWEAMITRY
IVPKLKLALQELQISPAVNSQELDQFNDRVMIWSSAIPAYCMVHLLEVEFFSKWLLVLYH
WLRSTDPDFDEVVYWYKSWRGILPPELIAHRRVRMLLAAGLVMMDNAAEGREVLLPGAAR
EATGCPEAAEDQQFDAAQRAPPQQVPGAAMEDLSFKDRILAYAEEHGLKFMPSAGKFYNG
VPVYEFGCIRVRLDSVKGLLFAQVQGSWSSVTLVQLMEMNRMATPC
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggatttggatgaagacctccccatgccggagctgcagtacaatctccaggtcctcgtc
gaccaggccgcggccggcatcaggggcctggacgagcagctgcagcgggagaaggaggac
gtggctagcctgacgcgtgagaaaaacagactggcagagcatgaggcttcgcacggacac
gagctgcaggtcatggaggccatcaccggggctctcgagcaggtccgggcggacgaggcg
gccggcgtgctcactccggaagccctgctagacaccttccgggaactgaagacgcgccac
gaggaggtgttcgacctctgtggcctcgcatggatcgcctgcgagttcgtgcgtcccctg
ctggtcagggcgtgccatgggtggcagccgctgcgtgatccctcgtttgggttggaacta
atgacgcagtggaaggattttcttcagcagcatccgcagcattatgatttcagatcagat
tacattgatccatacactcagcttctgctcgatgtgattctgccggtcgtcagagcatcg
ggcgctaactcatgggatgcccgggatcccgagccgatgctccggtttcttgaatcgtgg
gaagagctgctaccaccagttgtgcttgaatcaacgttggaggatgtgatcatgccgaag
ctctctgccgccatcgactcttgggatcgcgagaatgtgccgatccatgcgtgggtgcac
ccatggctgccgattctggggcaaagcaggacagagaccctgtgccattctgttcggtac
aagctgagcaccggcgtcctctgctcatggcaatcacacgacgcgtcggcctacgccgct
ctatctccatggaagggcgtgtttgatccggcgagctgggaggccatgatcacgcggtac
atcgtacccaagctgaagctggcactgcaggagttgcagatcagcccggctgttaacagc
caggagctcgaccagttcaacgaccgggtgatgatctggtcttctgctatcccagcgtac
tgtatggttcatttgttggaggtggaattcttcagcaaatggctactggttctctaccat
tggctgcgctccacggatcctgatttcgacgaggtcgtgtactggtacaagagctggagg
gggattttaccaccagagttgatcgcacatcgtcgtgtacggatgcttctggctgctggc
cttgtcatgatggacaatgccgccgaagggcgtgaggtgttgctgcctggggcggcaagg
gaggccacggggtgcccggaagcagcagaggatcagcagttcgatgcggcgcagcgagca
ccaccgcaacaagtgccaggagcagccatggaggatttgagtttcaaggaccgcatcttg
gcgtatgcagaggaacacggtttgaagttcatgcccagcgctggcaaattctacaatggt
gttccggtgtatgagtttggctgcataagagtccgcctagattccgtgaaggggctgctt
tttgcgcaagttcaaggatcatggagttctgtgactctcgtgcaattgatggagatgaac
cggatggcaacaccatgctaa
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