Lolium rigidum (rigid ryegrass): 124686007
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Entry
124686007 CDS
T09103
Name
(RefSeq) preprotein translocase subunit SECY, chloroplastic-like
KO
K10956
protein transport protein SEC61 subunit alpha
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03060
Protein export
lrd04141
Protein processing in endoplasmic reticulum
lrd04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
124686007
04141 Protein processing in endoplasmic reticulum
124686007
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
124686007
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrd04131
]
124686007
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
lrd02044
]
124686007
Membrane trafficking [BR:
lrd04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
SEC61 complex
124686007
Secretion system [BR:
lrd02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
124686007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecY
TssN
DUF485
Motif
Other DBs
NCBI-GeneID:
124686007
NCBI-ProteinID:
XP_047075978
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Position
1:184425408..184436160
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AA seq
547 aa
AA seq
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MATATPQKCCLPAPSRPPPISAPLRLRYLTIGASSFHFRGRRTATARRGRTAFVLSPRCT
LETAGPAFDPLGLYKEDSSSSDYQSPLSTFFGILSPVFGSSSGSRKDKSSYGRGAAAAME
DSTIDIGDFFKGPLPGKFLKLLGFLALSRLGVYIPLGGVNREAFAGNLDQNSLLGTLDSF
SGGGIGRLGICSLGIVPFINAQIVFQLLAQLYPKLQDLQKKEGEAGRKKILQYTRYASVG
FAIVQAIGQVLFLRPYVNDFSTEWVLTSVTLLTLGSVFTTFLGETISELKLGNGTSLLIF
TSIISYLPASFGRTVAEGFQAGNYVGLLTIILSFFFLVLGIVYVQEAERKIPLNYASRYS
SRAGGPQRSAYLPFKVNSSGVMPIIFSTSSLALPATLARFTGLEILKKAAIALTPGGSFY
LPTNVMLIAFFNYYYTFLQLDPDDLSEQLKRQGASIPLVRPGKNTAAFIKTVLSRISVLG
SAFLAVLAAGPSVVEQISHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIEFY
DVKSSDQ
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggccacggcgacaccgcagaaatgctgccttcccgccccctcgcggcctcctcccatc
tccgctcccctccgccttcgctacctcaccataggagcctcctccttccactttcggggg
cgccgcacggcaacggcaaggagaggaagaactgcctttgtcttgtccccaaggtgtacg
ttggagacggctggcccagcctttgatcctctggggctctacaaggaggactcttccagc
tctgattatcagtctcccttgtcgacattcttcggcatcctgtctccggtgttcgggagc
tccagtggctccaggaaggacaagtcatcctatggccgaggagcagcagctgcaatggag
gatagtactattgacattggtgacttcttcaagggccctctacctgggaagtttctgaag
ctccttggttttttggccttgtctcgacttggtgtgtatatacctttgggtggagtgaac
cgggaagcttttgctggtaatcttgaccagaacagtctgctgggcactttagattctttt
tctggtggaggcattggccggcttggaatatgctcccttggcattgttccatttatcaat
gcacagattgtgtttcagcttcttgcccagctttatccaaaattgcaagatcttcagaaa
aaagaaggggaggcaggtagaaagaagatccttcagtacacaagatatgcatctgttggt
ttcgcaattgtccaggctattggacaagttctttttctccgtccttatgttaatgacttc
agcacagaatgggtactaacatctgtgacactattgacactgggatcggtctttacaact
ttccttggtgaaacaatatctgagttgaaactcgggaatggaacgtctcttcttatattt
acaagtataatatcgtatttgcctgcatcattcggaaggacagttgcggagggatttcaa
gcggggaattatgttggacttctcacaatcatattatcattcttttttttagttcttggg
attgtctatgtccaggaagctgagagaaaaataccattgaactatgcttctcgatacagc
agccgagctggagggccccaacgttctgcatatctacctttcaaggtcaatagttccggt
gtcatgcctatcatattttctacatcttcattggctttacctgctactttggcacggttc
actggtttagaaattcttaaaaaagctgcgatagccctaactccaggaggttctttctat
cttccaactaatgtgatgcttatagcctttttcaattactactacacttttcttcaattg
gatcctgatgatcttagtgagcaattgaagcggcaaggtgcttcaataccgcttgtgcgg
ccaggaaaaaatacagctgcctttattaaaacagttcttagtcgtatctctgtcctagga
tctgcctttctggctgtactagctgctggaccatctgtggtcgaacaaatctctcacttg
acagcatttcggggattcgctggtacatcagtgcttatccttgttggatgtgcaaccgac
actgctcggaaagttcaggcagaaataatttctcagaaatataagaacatcgagttctat
gatgtcaaaagttctgaccaataa
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