Lolium rigidum (rigid ryegrass): 124686137
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Entry
124686137 CDS
T09103
Name
(RefSeq) WD repeat-containing protein RUP2-like
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd04120
Ubiquitin mediated proteolysis
lrd04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124686137
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
124686137
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lrd04121
]
124686137
Enzymes [BR:
lrd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124686137
Ubiquitin system [BR:
lrd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124686137
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
124686137
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
WDR55
EIF3I
Beta-prop_DCAF12
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_NOL10_N
Motif
Other DBs
NCBI-GeneID:
124686137
NCBI-ProteinID:
XP_047076089
LinkDB
All DBs
Position
2:complement(27256865..27258414)
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AA seq
402 aa
AA seq
DB search
MTNPSSPSSPPSTSRHQRRRHSQEANDDDEVDHGITFPARPEEDDELSPPRLEWDFRLAA
TVPSPALAGASDAIGSVDFDPAGRLLATGGIARKVRIYTVADFLHPPTQSTSSSCSPAAC
ICVPAKLSSVRWRPEGGAVGCGDYDGVVTEYDAERGVASWERDEHAGRRVWALDYAPHGA
SMAASGSDDRTAHVWDPRAPSGTSWATARAGGAVLCVEFDPSGGPQLAVGSADRRAAVYD
VRALGHGAVACMDGHARAVTYVRWAPARRVVTSAADGTHRLWEWPAATAVSGPAREVRSY
SGHVSGRSFVGMGLWRGAGLVASGSESNHVFVYDLRWAKPVWVHPFGLGDGDAGGGFVSA
VAWRQGDADAGGGALVAGRSDGVLKMFTCQRRTTDNPQVDDQ
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacccctcctccccctcttcacctccctccacctcccgacaccagcgccgacga
catagccaagaagccaacgacgacgacgaggtcgaccacggcattacgtttcccgcgcgg
ccggaggaggacgacgagctgtcgccgcctcggctggaatgggacttccggctcgcggcc
acggtgccgtccccggcgctggcgggcgcgtcggacgccatcggcagcgtcgacttcgac
cccgccggccgcctcctcgccaccggcggcatcgcgcgcaaggtccggatatacaccgtc
gccgacttcctgcacccgccaacgcagtctacgtcgtcgtcatgtagccccgcggcgtgc
atctgcgtgccggcaaagctcagcagcgtgcggtggcggcccgagggaggcgcggtgggg
tgcggcgactacgacggcgtcgtgacggagtacgacgcggagcgcggcgtggcgtcgtgg
gagcgcgacgagcacgcggggcggcgcgtgtgggcgctcgactacgcgccccacggcgcg
tccatggcggcgtccggctccgacgaccgcacggcgcacgtctgggacccgcgcgcgccc
tccgggacgtcgtgggccacggcgcgggccggcggcgcggttctgtgcgtggagttcgac
ccctccggcggtccgcagctggccgtgggctcggcggaccggcgcgcagccgtgtacgac
gtgcgcgcgctgggccacggcgcggtggcgtgcatggacgggcacgcgcgcgccgtcacg
tacgtgcgctgggcgccggcgcggagggtggtgacgtcggccgccgacgggacgcaccgg
ctgtgggagtggccggcggcgacggcggtgtcgggccctgcgcgggaggtgcggtcgtac
agcggccacgtgagcgggaggagcttcgtggggatgggcctgtggcggggcgcggggctg
gtggccagcgggtccgagtccaaccacgtcttcgtctacgacctcaggtgggctaagcca
gtctgggtccaccccttcggcctcggcgacggcgacgccggcggcggcttcgtcagcgcc
gtcgcctggcggcagggcgacgccgacgccggcggaggggcgctcgtcgccggcaggtcc
gacggcgtgctcaagatgttcacgtgccagcgccggactactgataacccacaagtcgac
gaccaatag
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