Lolium rigidum (rigid ryegrass): 124686578
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Entry
124686578 CDS
T09103
Name
(RefSeq) probable small nuclear ribonucleoprotein F
KO
K11098
small nuclear ribonucleoprotein F
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124686578
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124686578
03041 Spliceosome [BR:
lrd03041
]
124686578
03032 DNA replication proteins [BR:
lrd03032
]
124686578
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
124686578
Spliceosome [BR:
lrd03041
]
Complex A
U1 snRNP components
Sm proteins
124686578
U2 snRNP components
124686578
Complex B
U1 snRNP components
124686578
U4/U6.U5 tri-snRNP components
124686578
Complex C
U2 snRNP components
124686578
DNA replication proteins [BR:
lrd03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
124686578
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
124686578
NCBI-ProteinID:
XP_047076461
LinkDB
All DBs
Position
2:62043029..62045990
Genome browser
AA seq
86 aa
AA seq
DB search
MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFSGNL
GEILIRCNNVMYMRGVPEDTEIEDAE
NT seq
261 nt
NT seq
+upstream
nt +downstream
nt
atggccactgtaccagttaacccgaagcctttcctgaacaacctgacagggaaacctgtt
atcgtcaaactgaagtggggtatggaatacaaagggtaccttgtctctgtggactcctac
atgaatctgcagcttgctaacacagaggagtacattgacgggcaattctctggaaacctt
ggagagatactgataaggtgcaacaacgttatgtatatgcgcggcgttccggaggatacc
gagattgaggatgcagagtga
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