Lolium rigidum (rigid ryegrass): 124687036
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Entry
124687036 CDS
T09103
Name
(RefSeq) THO complex subunit 7B-like
KO
K13176
THO complex subunit 7
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124687036
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124687036
03041 Spliceosome [BR:
lrd03041
]
124687036
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
124687036
Spliceosome [BR:
lrd03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
124687036
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THOC7
MG280
GP24_25
YwqH-like
Motif
Other DBs
NCBI-GeneID:
124687036
NCBI-ProteinID:
XP_047076851
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All DBs
Position
2:103664880..103668873
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AA seq
243 aa
AA seq
DB search
MLTKGRRVAGRGEAMSAHYAFGPHEDDAIIKHRLLTRTTTTRGEPPLKKLQKKFMSFAAE
TEKDADNTMDCERLYKAFLQEINTFELPLLKSKAVVDANLREKESFNELQVEIQRQILQA
QTDIEDLKKQLEQSKIERQHKEECEAIRKLISLQPPRSETKKLIADLEKEITNLEAESAA
CARTLELRKKQFALLLHVVEELQISIEDEQRSIADELRAAAEEPKMSMEGGSGGGASDAM
AVD
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgcttaccaaagggaggagagttgctggaaggggtgaagcaatgtctgcacattatgca
tttgggccacatgaggatgatgcgattattaagcaccggcttctgaccaggaccacaact
accaggggtgaaccacctctaaagaagctccaaaagaagttcatgtccttcgctgccgag
acagagaaggatgcagacaatacaatggactgtgagagactgtacaaggcctttctacag
gaaattaacactttcgagctgcctcttctgaaaagcaaggctgtggttgatgcaaacctt
agggagaaggagagcttcaatgagctgcaggtcgaaatccagcgacaaatcttgcaagct
cagactgatattgaggatcttaagaagcaacttgaacaaagcaagattgagaggcagcac
aaggaggagtgtgaagcgatcagaaaactgatttctttgcagcctccacggtcagaaacc
aagaaactcattgctgatcttgagaaggagataactaatttggaggctgagagtgcagca
tgtgcaaggacgttagagcttcggaagaagcagtttgctcttctcctacatgtggtggag
gaattgcaaatctctatcgaagatgagcaaaggagcatagcagatgagctgagagccgcc
gctgaggagccaaagatgagcatggagggaggtagtggtggcggtgcttcagatgcaatg
gctgtagactga
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