Lolium rigidum (rigid ryegrass): 124687040
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Entry
124687040 CDS
T09103
Name
(RefSeq) high mobility group B protein 6
KO
K09273
upstream-binding transcription factor
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lrd03000
]
124687040
03021 Transcription machinery [BR:
lrd03021
]
124687040
Transcription factors [BR:
lrd03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
124687040
Transcription machinery [BR:
lrd03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
124687040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
CHDNT
Motif
Other DBs
NCBI-GeneID:
124687040
NCBI-ProteinID:
XP_047076854
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All DBs
Position
2:complement(103980444..103982580)
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AA seq
542 aa
AA seq
DB search
MATVAAAGRKRSPRGRKPLAAVLDNDVNISAGKADAAAALLSPPQKAKRASSRRGKLAAA
AVQADEPVGTSPAQALDIDATEVSAGKVEPAPGSTQKAKRAPSKGGRAKAAAAPSMADEL
TELQGMMEKLRLEKEKAEEMVRERDEVIRKKEEEIETKGKQQERLQAELKKMQRIKEFKP
TMNFPMVQSLLDKDQEGDDKGKKKKNKGKGKAGNERKKPAPAYVLWCKDQWAEIKKESSD
ADFKEVGNALGAKWKTLTAEEKQPYEERYRQEKEAYLQVVGQEKREAEAMKLLEEEQMRW
TAKELLEQYLKFRQEAEEGDSKKNGKKKSKKEKDPSRPKQPMSAYFLYSQERRAALVAEK
KNVPEIGKITGGEWKSMTEAQKAPYEEVARKQKEEYQKQMEVYKQNKLQESESLEKEEDE
QKKILKHEALQLLKKKEKADNIIKKTKEKRLKKKQENADPNRPKKPASSFLLFSKEARKQ
LTEERPGVNNSTLNALISVKWKELSGTEKKAWTDKAALGMAAYKTELEEYTKAHSSSPSS
SP
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgtggcggcggccgggaggaagaggagccctcggggccgcaagcccctcgcg
gcggtgctcgacaacgacgtcaacatctctgccgggaaggccgacgccgccgctgccctc
ctctcgccgccgcagaaggcgaagcgggcgagttccaggaggggcaagctggcagcggcg
gcggtgcaggccgacgagccggtggggacgtctcccgcccaggcgcttgacatcgacgcc
accgaggtgtccgctgggaaagttgaacccgcgcccggctcgacgcagaaggcgaagagg
gccccgtccaagggcggcagggcaaaggcggcggcggcaccgtcgatggccgacgagctg
acggagctgcagggcatgatggagaagctgcggctggagaaggagaaggcggaggagatg
gtccgggagcgggacgaggtgatccggaagaaggaggaggagatcgagaccaagggcaag
cagcaggagcgcctccaggcggaactcaagaagatgcagcgcatcaaggagttcaagccc
accatgaacttccctatggtccagtctctgctcgacaaggaccaggaaggggatgacaag
ggcaagaagaagaagaataaggggaagggcaaggctggaaacgagaggaagaagccagca
ccggcatatgtcctgtggtgcaaagaccagtgggccgagatcaagaaggagagctcggat
gcagacttcaaggaggtggggaacgctcttggcgccaaatggaagaccctcactgctgag
gagaagcagccgtacgaggagaggtaccggcaggagaaggaggcgtacctgcaggtggtt
ggtcaagagaagcgcgaagccgaggcgatgaagctgctcgaggaggagcagatgcggtgg
actgccaaggagctgctcgagcagtacctcaagttcaggcaggaggccgaggagggcgac
agcaagaagaatggcaagaagaagagcaagaaggagaaggacccctccaggcccaagcag
cccatgtcggcttacttcctctactcgcaggagaggcgtgctgcgctggtcgccgagaag
aagaatgtgcccgagattggtaagatcactggaggggagtggaagagcatgacggaggct
cagaaggctccctacgaggaggtagccaggaagcagaaggaagagtatcagaagcagatg
gaggtgtacaagcagaataagcttcaggaaagtgagagcttggagaaggaagaggatgag
cagaagaagatcctcaaacatgaggctctgcagcttctcaagaagaaggagaaggcagac
aacataatcaagaaaaccaaggaaaagcgtctgaagaagaagcaggagaacgcggacccg
aacaggcccaagaagcctgcctcttccttcctactcttcagcaaggaggcgaggaagcag
ctaacggaggagcgccctggtgtaaacaactccacgcttaacgcgctcatctcggtgaag
tggaaggagctgagtggcacggagaagaaggcatggacggataaggcggccctagggatg
gcagcatacaagacagagctggaggagtacaccaaagctcacagctcctccccctcctcc
tcaccttga
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integrated database retrieval system