Lolium rigidum (rigid ryegrass): 124687286
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Entry
124687286 CDS
T09103
Name
(RefSeq) DNA damage-binding protein cmr1-like
KO
K24755
WD repeat-containing protein 76
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lrd04121
]
124687286
03036 Chromosome and associated proteins [BR:
lrd03036
]
124687286
03400 DNA repair and recombination proteins [BR:
lrd03400
]
124687286
Ubiquitin system [BR:
lrd04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
124687286
Chromosome and associated proteins [BR:
lrd03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
124687286
DNA repair and recombination proteins [BR:
lrd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
124687286
DSBR (double strand breaks repair)
Other DSBR factors
Others
124687286
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
WD40_Prp19
WD40
Beta-prop_RIG_2nd
EIF3I
WD40_WDHD1_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
WD40_RFWD3
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR75_1st
Beta-prop_HPS5
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Motif
Other DBs
NCBI-GeneID:
124687286
NCBI-ProteinID:
XP_047077034
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All DBs
Position
2:134815317..134818346
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AA seq
440 aa
AA seq
DB search
MASTPDLEDGLTDYERLREENIRRNGAMLASVRRKADELSAAIRSANPKRGRGRPPGQSG
KKPCMKPDPPASSIVLRSSGLSPAYLSSSLASSILGAASSSPAEGKTRADDFDAGKELVL
KPAHVRRVVTSRVLSMRVLPLVDRTVVAAGDKFGNIGFWDVDGVSEDQDGDGAGVLYRYL
PHKSGVAAIVAHQAAPQKIYSCSYQGEICLMDFEKENFNMIHLCESPVYSLCQAQNRARC
LYFGDGNGDLTLFDERVGKVSTKWNVHDKRINSIDFHPENTHMLATSSRDRTACIWDVRS
MKMKEPDSLKVFKLDGPVQSAYFSHRGCMLAITSLHGTVRVFSMDDFDKSHEHNQAGSLL
HKFKVIWGWNDTDLYVGNKNKAIDIISVDVNDSGLSARNNTCLWSEYMTYVPCQLSAHPY
KVGHLACANCRGKVFLWTSA
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgaccccggatctcgaagacggtctcaccgattacgagcgccttcgcgaggag
aacatccgccgaaacggggctatgcttgcatccgtccgccgcaaggccgacgagctctcc
gccgccatccggtccgctaatcctaaacgagggcgtgggcgtccccccgggcagtccggt
aagaagccctgtatgaagcccgaccccccggccagctccatcgtactccgctccagcggc
ctctctcccgcctacctctcatcctcccttgcgtcctccatcctcggtgctgcctcgtct
tccccagcggagggcaagactcgtgcggacgatttcgatgctgggaaggagctggtgctg
aaacccgcgcacgtgaggagggtggtgacctcccgtgtactgtcgatgcgggtccttcca
ctcgtcgaccggaccgtggtggcggcgggagacaagttcgggaatattgggttctgggac
gtcgacggtgtctcggaggatcaggatggtgacggtgcaggcgtgctgtaccggtatttg
ccacacaagagcggtgtggcggcaatcgtggcgcaccaagcggcaccacagaagatttac
agctgtagctatcagggtgaaatttgtcttatggactttgagaaggagaactttaatatg
atccatttgtgtgagtctcctgtttactcgctctgtcaagcacaaaatcgtgccagatgc
ctatattttggtgatggaaatggtgacctgacacttttcgatgagcgtgtgggtaaggta
tcaaccaaatggaatgtgcatgacaagagaatcaactcaatagattttcatccggagaac
acacatatgcttgctaccagttcaagggatcgaacagcctgtatatgggatgtgagaagt
atgaaaatgaaggagccagatagcttgaaggttttcaaacttgatggacctgttcagtca
gcttatttctcacatagaggctgcatgttagcaataacaagccttcatggtactgttcga
gtatttagcatggatgactttgataagtcgcatgagcataaccaggcaggcagtttgctt
cataaattcaaggtaatctggggttggaacgacaccgacctatatgttggaaacaagaat
aaggcaatagatattatctcagttgatgtcaatgacagtggcctctcggctcggaacaac
acatgtctttggagtgaatatatgacatacgttccatgccagttatctgcacacccatat
aaagttggccatcttgcttgtgcaaattgccgtggcaaggtgttcctttggaccagtgct
taa
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