Lolium rigidum (rigid ryegrass): 124687289
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Entry
124687289 CDS
T09103
Name
(RefSeq) N-glycosylase/DNA lyase OGG1
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
124687289
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lrd03400
]
124687289
Enzymes [BR:
lrd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
124687289
DNA repair and recombination proteins [BR:
lrd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
124687289
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH
RecR_HhH
Motif
Other DBs
NCBI-GeneID:
124687289
NCBI-ProteinID:
XP_047077036
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All DBs
Position
2:complement(135011431..135013765)
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AA seq
407 aa
AA seq
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MRLPLSPRLAAAAAMPPRHRRLVTPPMPPPPPLLSSTPPPAKLVETPKPGTPQPHPPPAR
RRLPLPLADDEEWHPLALSAADLSLPLTLPTGQTFLWRRTSLSPLRFTGAVGPHLVSLSH
LPDGRLAFLLHNADPAATPSSSSVPAARAALCDYLNAAVPLADLWRQFTAADARFAEVAA
RLGGGGARVLRQDPVQCLFQFLCSSNNNIARIEKMVWTLAGYGERLGEVGGFVFHRFPTI
ERLAQVPEQELRDAGFGYRAKYIVGTAKELVAKPGGGAKWLALLRDRELPEVIEGLCTLP
GVGPKVAACIALFSLDKNQAIPVDTHVWKVATQYLLPELAGKSLTPKLSIVVADAFVAKF
GEYAGWAQTVLFIGQLPAQKLLATEVTSDATKATKRKRGAKIVEIQT
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcttccactctcccctcgcctcgccgccgccgccgcgatgcccccacgccaccgt
cgcctcgtcacaccgccgatgcctcctccccctcccctcctctcctccaccccacctccg
gcaaaactcgtagaaaccccaaaacccggaaccccccagccgcaccctccccccgcccgc
cgccgcctccccctccccctcgccgacgacgaggagtggcaccccctcgctctctccgcc
gccgacctctcgctccccctcaccctccccaccggccagaccttcctctggcgccgcacc
tccctctccccgctcagattcaccggcgccgtgggcccgcacctcgtctccctctcccac
ctccccgacggccgcctcgccttcctcctccacaacgccgaccccgccgccacgccctcc
tcctcctccgtacccgccgcccgcgccgcgctgtgcgactacctcaacgccgccgtcccg
ctcgccgacctctggcgccagttcaccgccgccgacgcgcgcttcgccgaggtcgccgcg
cgcctcggcggcggcggcgcccgggtgctccggcaggacccggtccagtgcctgttccag
ttcctctgctcctccaacaacaacatcgcaaggatcgagaagatggtctggacgctggcc
ggatacggggagcggcttggcgaggtcggcggcttcgtcttccaccggttccccaccatc
gagcgcctcgcgcaggtaccggagcaggagcttcgggacgccggatttgggtacagggca
aagtacattgttggcactgctaaagaattggtagcaaagcctggtggaggtgcgaaatgg
cttgccttgttgcgtgacagggaacttcctgaggtgattgagggtctttgcaccctgcca
ggtgttggcccaaaagttgcagcctgcattgctctcttctcccttgacaagaatcaggct
atacctgttgatacacatgtctggaaggttgccacacaatatctgttacccgagctagct
ggcaagagcctgaccccaaagctgagtattgttgtggccgatgcatttgtagctaaattt
ggggagtatgctggttgggcgcagactgttcttttcattggccagctacctgctcagaaa
cttctggctactgaagttaccagtgacgcgacaaaagctaccaagaggaagcgtggggca
aagattgttgaaatacagacgtaa
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