Lolium rigidum (rigid ryegrass): 124687356
Help
Entry
124687356 CDS
T09103
Name
(RefSeq) protein PAF1 homolog
KO
K15174
RNA polymerase II-associated factor 1
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lrd03021
]
124687356
Transcription machinery [BR:
lrd03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
124687356
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Paf1
Motif
Other DBs
NCBI-GeneID:
124687356
NCBI-ProteinID:
XP_047077108
LinkDB
All DBs
Position
1:complement(195419320..195425254)
Genome browser
AA seq
620 aa
AA seq
DB search
MAYRPYAPPQGGFPPQPPPMNPYGQPPPQQPGYGHMPPPPPFIAPPPPPGPPPPHQPQYN
FGHGPPQQQQQQQLPPPPQLYYQPPPPPYGGNSSQPPPPPPPMSPPSAPPPPPPAQPPLR
EAPPAPKEQQAKAALPRVETEEERRARKRREYEKQKAEERKQQQMMRQSQATILQKTQQV
RTAQQKQPQTQSRRPQASASAGTRMGTTAPRPASAPNTERFENRLKKPTTFLCKHKFRNE
LPDPSAQLKWLPLNKDKDRYTKYRITSLEKNYMPKMIVPEDLGIPLDLLDMTVYNPPAVQ
PPMAPEDEELLRDDEVLTPVKPEGIRKKERPTDKGMSWLVKTQYISPLSTDAAKMSITEK
QAKEMRESREGRDNVLDNLNDRQKRIKAISESFRAAKSRPVHQTKRGMEPEFVLPLVPDF
DRYNDPFVMVNFDGDPTADSEQFNKLERSVRDECESRALMKSFQVSGSDPTKQEKFLAYM
APAPVELVKDMDDEDEDIQYSWIREYHWEVRGDDKQDPTTYLVAFDDDSAKYLPLPTKLV
LQKKKAKEGRTGDEIEHFPVPSRITVSRTAHGDEMEHGESSRMHENSKRRRSSVDDDLDE
HPKHSRVEDMDQYSADEYSD
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggcgtaccggccgtacgcgccgcctcaggggggtttcccgccgcagccgccgccgatg
aacccgtatggccagccgccgccgcagcagccggggtacggccacatgccgccgccgcca
ccgtttattgcgccgccgcccccgcccggaccgcccccgccgcaccagccccagtacaac
ttcggccacggccccccacagcaacagcaacaacaacagctgccgccgccgccccagttg
tattaccagcccccaccgccgccgtacggcggcaacagcagtcaacctccccctccgccg
ccgccaatgtctcccccttcggcgccgccaccaccacctccggcccagccaccccttcgg
gaggctccgccggccccaaaggagcagcaagccaaggcggcgctgcccagagtggagacg
gaggaggagcggcgggcgcgcaagaggcgcgagtatgagaagcagaaggcggaggagcgg
aagcagcagcagatgatgcgccagtcgcaggcaaccatcctgcagaagacgcagcaggtg
cgcaccgcgcaacagaagcagccgcagacgcagagccgccgcccccaggcgtcggcatca
gctgggacacggatggggacaactgcgccccgcccggcctctgctcccaacactgagagg
tttgagaatcggctcaagaagccgacaacgtttctctgcaagcacaagtttagaaatgaa
ctgccggatccaagtgctcagctgaaatggctgcctctgaataaggacaaggaccgatat
accaaatacaggatcacttcattggagaaaaactatatgcctaaaatgattgtccctgag
gatctcgggatacctcttgacctacttgatatgactgtatacaaccctcctgctgttcag
ccgcccatggctccagaagatgaagaactattgcgtgatgatgaggttctcacccctgtt
aaaccagaaggtataaggaaaaaggagaggccaaccgacaaaggcatgtcttggctggtc
aaaacacaatacatttctccacttagtactgatgcagccaaaatgtccattactgaaaag
caagcgaaggaaatgcgagaatcacgagaaggtcgtgataatgtcctggacaatcttaat
gacagacagaaacggatcaaagctatctcagaatccttcagagcagctaaatcacggcct
gtccatcagactaaacgtgggatggaaccagagtttgttctcccgctggtacctgatttt
gataggtataacgatccatttgtcatggtgaattttgatggagatcctacagctgattca
gagcaatttaataagttagagagatctgtacgtgatgaatgtgaatccagggctctgatg
aaaagctttcaagtcagtggttcagaccctacaaaacaagagaaatttctagcatacatg
gctccagcacctgttgagcttgtcaaggacatggatgatgaagatgaagatattcagtac
tcctggattcgtgaatatcactgggaagtaaggggggatgataaacaggatcccacaaca
taccttgtcgcatttgatgatgatagtgcaaaatatctgcctcttcctactaagttagta
ttgcagaagaagaaagctaaagaggggagaactggcgatgaaatcgagcattttccagtg
ccttccagaattactgtgagcaggacagcacatggtgatgagatggaacacggagaatcg
tccaggatgcatgagaattcaaagcgacgaaggtcttctgttgatgatgaccttgatgag
catccgaagcattctcgtgtagaagacatggaccagtatagtgcagacgaatattccgat
tga
DBGET
integrated database retrieval system
