Lolium rigidum (rigid ryegrass): 124687364
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Entry
124687364 CDS
T09103
Name
(RefSeq) uncharacterized protein LOC124687364
KO
K14315
nucleoporin NDC1
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124687364
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124687364
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124687364
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
124687364
NCBI-ProteinID:
XP_047077112
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All DBs
Position
2:complement(141370686..141376498)
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AA seq
503 aa
AA seq
DB search
MDRAPPRGAPRDAVGQRWLAVFAFQAALSAAASVIHLATSPRRRHASLGVPPALLLALHP
FLSCAATGLLALAFLISASPHPRPPPVPLRALAASLLAAAGALCVAAAASLVPEDAGWAA
VAGLGFRGAVLGAVFAAHYFGRGRWLLQFPVVQRPLFYGLKMGLLPSMKRALKVSLQAFC
LSFVLIFILPRQFRIGGSIGSQIITQIGIFMVTTGVSFCWEISHHFVQVVHTRRCSFTPP
QSTAAAETNPTDYILETLELSDPRSLMQYLAFQDLCAVSECNIEPWRRGAFFEESGETYK
RIVTACLKPLEDFTTKIAEALEGFSSDKPELLSQQSKLYGAFSDAQICSWCARTLATLTA
RSRREDRYGVAQLTGCNAAVMSTLLSALVAVEACLGKKTNPQPVHSLGPASIRWGNFSTA
KKGNVTAIASTQRGGLHTKAYLMADVFRTSIYQIVSAFLDDMRANAKSSSLEKNWISEGR
KPIFGSPAVLVQKLSLFTEYHAV
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggacagggccccgccgcgcggcgctccccgcgacgccgtcggccagcggtggctcgcc
gtcttcgccttccaggccgcgctctcggcggccgcctccgtaatccacctcgcgacctcc
ccgcgccgccgccacgccagcctcggggtgcccccggccctcctcctcgcgctgcacccg
ttcctctcctgcgccgccacggggctcctcgcgctcgccttcctcatctccgcctcgccc
cacccgcgcccgccgccggtgccgctgcgcgcgctcgcggcctccctcctcgcggcggcc
ggcgcgctctgcgtggccgcggcggcgtccctcgtccccgaggacgccgggtgggccgcc
gtcgccgggctggggttccgcggcgctgtgctgggcgcggtgttcgccgcccactacttt
gggcgtgggaggtggctgctccagttccccgtcgtgcagcgacctctcttctatggattg
aagatggggctcctaccatctatgaaaagggctctaaaggtgtcgcttcaggccttctgc
ctttcatttgtcctgatttttattcttccccggcaattcagaattggaggatccattgga
agccaaattatcacccaaatcggcatctttatggtgaccacgggtgtttctttctgttgg
gaaataagccatcattttgtccaggttgtgcatacaagaaggtgcagttttactccacct
cagagcactgctgcggcagagactaatcctactgattatatccttgaaacattggagcta
agtgatccacggtcgctcatgcagtaccttgccttccaagatttgtgtgcagtatctgaa
tgtaacatagaaccttggcgccggggtgccttcttcgaggaatctggtgaaacttacaaa
agaatcgtgacagcctgtttgaagccacttgaggacttcactacaaaaattgctgaagcg
ctcgaagggttttctagcgataagccagaactattgtcacaacaatctaagctctatggt
gcatttagtgatgcacagatatgctcatggtgtgctcggacattggccacattgactgca
cgctcacggcgagaggatcggtacggtgttgctcaactcactggctgcaatgctgctgtg
atgtctacgttgctgtctgcgctggttgcggtcgaagcatgtttaggaaagaaaaccaac
ccacaacctgtgcactcactgggtccagcaagcattaggtggggcaacttctccacagca
aaaaagggcaacgtaactgccattgcaagcacacagagaggcggtctgcacactaaagct
tatctgatggctgatgttttccggacttcaatctatcagatagtttcagccttcctggat
gatatgcgggcaaatgcaaaatcttcgagtctggagaagaactggatcagtgaaggaaga
aaaccgatatttggttcacctgctgtgttggttcagaagctgagcctgttcactgaatac
catgctgtctga
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