Lolium rigidum (rigid ryegrass): 124687413
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Entry
124687413 CDS
T09103
Name
(RefSeq) tRNA pseudouridine synthase A-like isoform X1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lrd03016
]
124687413
Enzymes [BR:
lrd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
124687413
Transfer RNA biogenesis [BR:
lrd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
124687413
Prokaryotic type
124687413
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
124687413
NCBI-ProteinID:
XP_047077151
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Position
2:complement(147059291..147061922)
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AA seq
600 aa
AA seq
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MAAASPPPSPPHPKRPKMSSSSDPDPEPTSLSAAGADPGQARRRYKRRKVAILLAYLGAG
YQGMQKNPGARTIEGDLEEALYQAGAVPEAERAAPARYEWARAARTDKGVSAAAQVVSGR
FYVDPPGFIERLNAKLAPQIRAFGYVRVTNSFSAKKFCDRRRYVYLLPMLALDPSAHPDR
EAVKASAGSGNELAKCLECSERGRKVPDIMGREGKLPNPEEEKVLDASGGETVPAHGEVG
SNGSAISVSASSGNGTAAQNAEPGSNGAEKFDIEQAGSTFHSEALPTNTSETICSDSTAG
SVSVAASVVAEKEHNSEPVVSEEENVQAMDIQKGNGEESPQSTFAYTNEVKEKFSRILKH
YVGTRNFHNFTTRTKAEDPAAKRFIISFTADRVVSLDGIDFVRCEVVGQSFMLHQIRKMV
GLAVAVMRNCAPESIYDVAFRKDIRLNVPTAPEVGLHLDECMFTSYNMKWKDTHEAVSIE
PYAEDAEDFKIKYIFPHIAAMEHKEGAVALWLHSLNSRNYPDFRYMETTGSEARVGAGVG
NTEEALVPAVAGIDNMDKAQDPVVAGVENIEEAQDPVVAGVEKVEEAPVPIDNYEAQRSH
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgcctcgccgccgccctccccgccccatccgaagcggcccaagatgtcctcc
tcctccgaccccgaccccgagcccacctcgctctccgccgccggcgcggatcccgggcag
gctcgccgccgctacaagcgccgcaaggtggccatcctcctggcctacctcggcgcggga
taccagggtatgcagaagaatccgggcgcccgcaccatcgagggcgatctcgaggaggcg
ctctaccaggcgggcgccgtccccgaagccgagcgtgccgcgcccgcccggtacgagtgg
gcacgcgccgcgcgcaccgacaagggcgtgagcgccgcggcgcaagttgtctccggccgc
ttctacgtcgacccgccgggattcatcgagcgcctaaatgccaagctcgcgccacagatc
cgggccttcggctatgtgcgcgtcaccaactcgttcagcgccaagaagttctgcgaccgc
cggaggtatgtgtatctgctccccatgttggcgctcgaccccagcgcccaccccgaccgc
gaggctgtcaaggcgagcgcggggagtggcaacgaacttgccaagtgcttggagtgctcg
gagaggggcaggaaggtgccagatattatgggccgggaggggaagttgcccaaccctgag
gaggagaaggttcttgatgcttcgggaggggaaactgtgccagctcatggagaagtagga
tcaaacgggagtgcaatttctgtttcagctagctctggtaatggaacagcagctcagaat
gctgaacctggatcaaatggtgcagaaaagtttgatattgaacaagctggcagtactttc
cattccgaagctttaccaaccaacaccagtgagactatctgttctgattcgaccgcaggt
tcagtcagtgttgctgcttcagttgtagctgagaaggagcataattctgagcctgtggtc
agtgaggaggagaatgtgcaagctatggatattcagaagggaaatggagaagaaagtccc
caaagcacatttgcttacactaatgaagtgaaagagaagtttagtaggatcctcaagcat
tatgttggaacccgcaatttccacaacttcactacaagaactaaggctgaggatcctgca
gccaagaggttcatcatttcattcactgctgatcgtgttgttagccttgatgggattgat
tttgtcagatgcgaggttgtcgggcagagtttcatgcttcatcaaatccggaagatggta
ggccttgctgtagcagtgatgaggaactgtgcacccgagtcaatatatgatgtagcattc
cgcaaggatatcagacttaatgtgcctactgcacctgaggttggactgcacctagatgaa
tgtatgttcacctcatataacatgaaatggaaggatacacatgaggcagtttcaattgaa
ccctatgctgaggatgctgaagatttcaagatcaagtacatattccctcatattgctgca
atggaacacaaggagggagctgtagctctctggttgcactcattgaacagcaggaactat
ccagatttccgctacatggagaccactggatctgaggcgagggttggggctggagttggg
aatacggaagaagcactagttccagctgtggctggaattgataacatggataaagcacaa
gatccagttgtggctggagttgagaatattgaagaagctcaagatccagttgtggctgga
gttgagaaggtggaagaagcaccagtgccaattgataattatgaagcacagagatctcac
tga
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