Lolium rigidum (rigid ryegrass): 124687781
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Entry
124687781 CDS
T09103
Name
(RefSeq) nuclear cap-binding protein subunit 2-like
KO
K12883
nuclear cap-binding protein subunit 2
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03013
Nucleocytoplasmic transport
lrd03015
mRNA surveillance pathway
lrd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124687781
09122 Translation
03013 Nucleocytoplasmic transport
124687781
03015 mRNA surveillance pathway
124687781
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124687781
03041 Spliceosome [BR:
lrd03041
]
124687781
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
124687781
Spliceosome [BR:
lrd03041
]
Common components
Common spliceosomal components
Cap binding complex
124687781
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
DUF5721
Motif
Other DBs
NCBI-GeneID:
124687781
NCBI-ProteinID:
XP_047077485
LinkDB
All DBs
Position
2:180778542..180782003
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AA seq
240 aa
AA seq
DB search
MASLFKDPSKLSVYRDRRFTGTQEEFEAALLASLTVYVGNMSFYSTEEQAYELFSRAGEI
KKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYISGTMLDDRPIRVDFDWGFQEGRQWG
RGRSGGQVRDEYRTDYDPGRGGYGKMVQKELEAQRELVDYGVGFQTNAPPQFDRADRKRG
YSDRNDRDYQRRRSGPDTSRRAPDSDSRRDANQEPEKNPRFREKGDSDEEEDDYDNKRRR
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccctcttcaaggacccgagcaagctgtcggtgtaccgggaccggcggttcacc
gggacgcaggaggagttcgaggcggcgctgctcgcgtcgctgacggtgtatgtggggaac
atgtccttctacagcacggaggagcaggcctacgagctattctcccgcgccggcgagatc
aagaagatcatcatgggcctcgacaagaacaccaagaccccctgcggcttctgcttcgta
ctgtactactccagggaagatgctgaagatgcggtcaaatatattagtggcacaatgctt
gatgatcgcccaattcgtgttgattttgattggggctttcaagaaggcaggcaatggggc
cgtggaaggagtggtggacaagttagagatgaataccgcacagattacgatcctggaagg
ggtggctatggcaagatggttcagaaagagctagaagcacaaagagagttggttgactat
ggtgtaggttttcaaacaaatgctccacctcagtttgacagagctgacaggaagagagga
tacagcgaccggaatgacagagattaccaacgaagacgctctgggccagatacctccagg
agagcacctgactcggactctaggagagatgcaaatcaagagcctgagaagaatcccaga
tttcgcgagaaaggtgattctgacgaggaagaagatgattacgataataaacgccgtcgc
tga
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