Lolium rigidum (rigid ryegrass): 124687979
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Entry
124687979 CDS
T09103
Name
(RefSeq) ABC transporter B family member 11-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
124687979
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lrd02000
]
124687979
04147 Exosome [BR:
lrd04147
]
124687979
04090 CD molecules [BR:
lrd04090
]
124687979
Enzymes [BR:
lrd01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
124687979
Transporters [BR:
lrd02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
124687979
Exosome [BR:
lrd04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
124687979
CD molecules [BR:
lrd04090
]
Proteins
124687979
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_29
AAA_22
AAA_16
RsgA_GTPase
Zeta_toxin
AAA_30
AAA
APS_kinase
AAA_15
DLIC
Motif
Other DBs
NCBI-GeneID:
124687979
NCBI-ProteinID:
XP_047077653
LinkDB
All DBs
Position
2:201610483..201618129
Genome browser
AA seq
1235 aa
AA seq
DB search
MHRLFAFADRRDAVLMTVGAVAAMANGVAMPFLAFLVGDLVDAFGPAHRANVVHAVAKVR
AVSVRFVYLAIASGVAGFLQVSCWMVTGERQAARIRGLYLETILRQDISFFDVETSTGEV
IERMSSDTVLIQDAIGEKVGKFLQLISTFLGGFIIAFSRGWLLSLVMLSSIPPVVASAAV
MSLVLSKLSYRSQMAYAEAGKVVEQTIGSIRTVVSFTGERRAIDKYQEFLKISYRSTVHQ
GTAGGLGIGSLLLIVFCSYGLAVWYGARLIIEKGYTGGYIINVLMAIMTGAMALGQSSPC
LTAFASGQIAAHKMFATIYRKPEIDASDKGGIILDNFVGDVELKDVNFSYPARPEQRIFN
GFSISIPTGTTVALVGESGSGKSTVISLVERFYDPQSGEVLLDGVNLKELNLSWIRQKIG
LVSQEPILFTTTIGENIGYGKRGASEEEIRSAIVLANAAKFIDKLPNGLDTMVGEHGTQL
SGGQKQRIAIARAILKNPSILLLDEATSALDAESERVVQDALNNIMVNRTTIIVAHRLST
VKNADTISVLHRGQLVEQGPHAELIKDSNGAYSQLLRLQEVNTDRKGSHGDDSNRLQSAP
DTANSASQHSSINPSLERSMSRYSAQGGSRRNSQTFSLNEHVTERVDDVKSEKNVIRRLL
YLHKPEIPILLLGCTAAAANGAILPVFGMLLSSAINTFYEPPQKLRKDSAFWAEIYVMLG
VISILIIPMQYSLFNMAGGKLIERIRAVSFTRVVYQEIGWFDDPLNSSGAIGSRLSGDAA
SIKSIAGDVLSLIVQSLSTSVVGIIIAMTANWQLALIVLCFLPCVIAQSYAQGRLMRGFG
ADAKEMYEQASTIASDAISNIRTVASFCAEEKIIESYRNKCEGPLTKGVRQGTISGVGYG
FSFALLFCFYAVSFYVGARFVHNGTAEVGQVFKVFFSLTMMAVGVSQSSSLARDYSKVQD
AAVSIFRIIDRVSKIDASSEVGRTLDTVEGNIELQHVSFKYPARTDVQIFRDLCLRIPSG
KTVALVGESGSGKSTVIALIERFYDPDSGAIFLDGVDLKTLKLSWLRQQIGLVGQEPVLF
DDTIRANIAYGKNEQVSEEEIIAVAEAANAHRFISSLPHGYDTSVGERGVQLSGGQKQRI
AIARAILKDPKLLLLDEATSALDAESERIVQEALDRVTVGRTTVVVAHRLSTITAADKIA
VVKNGVVAEEGRHEQLLRLPGGAYASLVALQSSSS
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgcaccggctcttcgcgttcgcggaccggcgggacgcggtgctcatgacggtcggcgcc
gtggcggccatggccaacggcgtcgcgatgccgttcctcgccttcctcgtcggcgatctc
gtcgacgcgttcggccccgcccaccgcgccaatgtcgtccacgccgtcgccaaggttcgc
gccgtttctgtcagatttgtgtacctagcaatagcttctggagtagcagggtttcttcag
gtgtcatgctggatggtgactggtgaaaggcaggctgcacgcatccgagggctgtacctt
gagactatacttagacaagatatatcattttttgacgtggagacgtcaactggagaagtt
attgaaaggatgtctagtgacacagtgttaattcaagatgccattggagaaaaggtgggc
aagtttctccaactgatatcaacgtttcttggtggttttatcattgcattttcaagaggc
tggcttctgtccctggtaatgttgtcaagtattcctcctgttgtagcatcagctgcagtc
atgtcgcttgtcctgtcaaagttatcataccgttcccagatggcctatgccgaagcaggg
aaagtcgttgaacaaacaataggatcaatcagaacggtggtatctttcactggggagagg
agagcaattgacaaatatcaggagtttttaaaaatatcatacaggtcaacagtccaccag
ggcacagccgggggccttggaattggttcccttttgcttattgttttctgcagctatgga
ttagctgtatggtatggtgcaaggttgattattgagaagggatatactgggggatatatc
attaatgtattgatggcgatcatgactggtgcaatggctcttggccaatcttcgccatgc
ttaactgcttttgcatcaggacagattgccgctcataaaatgtttgcaacaatttataga
aaacctgagattgatgccagtgacaagggtggcattatactggacaactttgttggagat
gttgagttgaaagatgtcaatttcagttaccctgcacggcctgagcaacgtatcttcaat
ggcttctctattagcattccaactggcacaacagtggcattggttggggagagtggaagc
gggaagtctactgtaattagcttggtagagagattctatgatccacaatcaggtgaagta
cttttggatggtgttaatctgaaagagctaaaccttagttggataaggcagaaaataggg
cttgttagccaagagcctattcttttcacaaccactataggagaaaatatagggtatgga
aaaagaggtgcatcagaggaagaaatcaggagcgcaattgtgctggccaatgctgcgaag
ttcatcgacaagttaccaaatggacttgatacaatggttggtgagcatggaacacaacta
tccggcggacagaaacagagaattgcaattgcaagagcaattttgaaaaaccccagcata
ctacttcttgatgaagctacaagtgcacttgatgccgagtctgaacgtgtagttcaagat
gcacttaataatatcatggtgaacagaaccacaataattgtggcgcatcgcctgagcact
gtcaaaaatgctgatacaatatcggtgctgcatcgtggacagcttgtagaacaaggaccg
catgctgagttgataaaagattccaatggagcatactctcaacttttacgtcttcaagag
gttaatacagataggaagggatctcatggagatgactccaacaggttacaatcagcaccg
gatactgcaaattctgcaagtcaacacagcagcataaatccatcacttgagagatctatg
agtagatattcggcacagggtggaagcagaaggaactcacagacattctcattgaatgaa
cacgtaaccgaaagggttgatgatgtgaagtcagagaagaatgtaatcagacgcctactc
taccttcataagcctgagattccaattcttctcttaggatgcactgctgccgcagccaat
ggtgctatacttcctgtgttcggtatgctgctttcaagtgccattaacacattctatgaa
ccaccccagaaattgagaaaagattcagcgttctgggcagagatctatgtgatgttgggt
gtcatctccatccttatcatcccaatgcaatactctttgttcaacatggcaggtggtaaa
cttatcgagcgcatacgtgctgtatcatttactcgggttgtttaccaggaaataggatgg
ttcgatgacccgttgaacagcagtggcgcaataggctccaggttatcaggggatgcagca
tctattaagagcattgctggggatgtcttatcattgatagtgcaaagcctaagcacttct
gttgtcggtattataatagccatgactgcaaactggcaactagcactcatagtattgtgc
ttccttccttgcgtgattgcacagagttacgctcaaggcaggttgatgaggggttttggt
gctgacgccaaggaaatgtacgaacaagcaagcacaattgccagtgatgccatcagtaac
atcaggactgttgcttcattttgtgcagaagagaagataatcgaaagctaccgaaacaaa
tgtgaaggtcctttgacgaaaggagttcgtcaagggactataagtggtgtgggttatgga
ttctcattcgcgttgctcttctgtttttatgctgtatccttttacgttggagctcgcttt
gtacacaatgggacagcagaagttgggcaagtcttcaaggtcttcttttctttaaccatg
atggctgttggagtttcgcagtcgagttcgcttgctcgggattatagcaaagtgcaagat
gcagctgtttctattttcaggattattgatagggtatccaagattgacgcaagctctgag
gtaggaaggacactagacacagtggaagggaatatagagttgcagcacgtgagcttcaag
taccctgctcggactgacgtgcaaatcttcagagatttgtgcttgaggataccatctggc
aagactgtggcgcttgttggggaaagcggaagtgggaaatcgacggtgatagccttgatc
gagaggttctacgatcctgactctggtgccatctttctagacggggttgatctgaagacc
ctcaagctcagctggctcaggcagcagattggtctggtaggccaagaaccagtcctcttc
gacgacaccatcagagcaaacatcgcctacggcaagaatgagcaggtatccgaggaagag
atcatcgccgtcgccgaggccgccaatgcccaccggttcatctcctccctcccacacggg
tatgacacgagcgtcggcgagcgtggggtgcagctatccggcgggcagaagcagcggata
gccatcgcaagggcgatcctcaaggaccccaagctgcttctgctggacgaggcgaccagc
gcgctggacgctgagtcggagcgcatcgtgcaggaggcactggacagggtgactgtcgga
aggacaacagtggttgtggctcaccggctgtcgaccatcaccgcggccgacaagattgca
gtcgttaagaatggcgtggtcgccgaggaaggccggcacgagcagctgctgcgcctgccc
ggtggggcctatgcgtcccttgttgcgttgcagtctagcagctcgtga
DBGET
integrated database retrieval system
