Lolium rigidum (rigid ryegrass): 124688044
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Entry
124688044 CDS
T09103
Name
(RefSeq) heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd00900
Terpenoid backbone biosynthesis
lrd01100
Metabolic pathways
lrd01110
Biosynthesis of secondary metabolites
Module
lrd_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
124688044
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
lrd01006
]
124688044
Enzymes [BR:
lrd01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
124688044
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
124688044
2.5.1.29 geranylgeranyl diphosphate synthase
124688044
Prenyltransferases [BR:
lrd01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
124688044
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
124688044
NCBI-ProteinID:
XP_047077716
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All DBs
Position
2:complement(208822377..208823674)
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AA seq
345 aa
AA seq
DB search
MALSPLFVTFPLPVPKMPATSKSSRSLPIRASAAAAATASPSFDLRRYWTSLISEVEGEL
DAAMPIRPPESIHNAMRHAVFPGAGKEGSAKRAPPVLCVAACELLGGPRAAALPTAAALE
MLHAASLVHDDLPCFDAAPTRRGRPSTHAAYGTDMAVLAGDALFPLAYTHVIAHTPSPDP
VPHAVLLRVLAELARTVGSTGMAAGQFLDLAGATALGEAEVMQVLTKKFGEMAECSAACG
AMLGGAGPDEEAALRRYGRTIGVLYELVDDIRSASGNGKMRSNASVLRALGMDRALGIVE
ELKAQAKMEAERFGDKYGDRVLPLYSFVDYAVERGFELQDATARP
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggctctctcgcccctcttcgtcaccttccctctcccggtcccgaagatgcccgccacc
tccaaatcaagccgctccctcccgatccgggcctcggccgctgccgccgccaccgcgtcc
ccatcttttgacctgcgccgctactggacctcgctgatctcggaggtcgagggcgagctc
gatgccgcgatgcccatccgcccgccggagagcatccacaacgccatgcgccacgccgtc
ttccccggtgccgggaaggagggctccgccaagcgcgcgcccccggtgctctgcgtcgcc
gcctgcgagctcctcggcgggccgcgcgccgccgcgctccctaccgccgccgcgctcgag
atgctccacgcggcgtcgctagtccacgacgacctgccgtgcttcgacgccgcgcccacc
cgccgcggccgcccgtccacccacgccgcctacggcaccgacatggccgtcctcgcgggc
gacgcgctcttccccctcgcctacacccacgtcatcgcccacaccccctccccggacccc
gtgccccacgccgtcctcctccgcgtcctcgcggagctcgcgcgcaccgtgggatccacc
ggcatggccgccggccagttcctggaccttgccggcgccactgccctcggcgaagccgag
gtgatgcaggtcctgaccaagaagttcggcgagatggccgagtgctccgccgcctgcggc
gctatgcttggtggcgcgggtcctgacgaggaggctgcgttgcggcgatatggccgcacc
atcggcgtcctttacgagctcgtcgacgacatacggagcgcgtcggggaacggtaagatg
aggagcaatgccagcgtcctgcgcgcgctcggcatggaccgtgcgctcggcatcgtggag
gagctcaaggcgcaggccaagatggaggcggaaaggttcggcgataagtacggcgatcgg
gtgctgcccttgtacagcttcgtggactacgccgtggagagggggtttgagcttcaggat
gcaactgcaaggccttaa
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