Lolium rigidum (rigid ryegrass): 124688223
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Entry
124688223 CDS
T09103
Name
(RefSeq) RNA polymerase sigma factor sigA-like
KO
K03086
RNA polymerase primary sigma factor
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lrd03021
]
124688223
Transcription machinery [BR:
lrd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
124688223
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Motif
Other DBs
NCBI-GeneID:
124688223
NCBI-ProteinID:
XP_047077893
LinkDB
All DBs
Position
1:202720460..202723705
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AA seq
506 aa
AA seq
DB search
MTATPAVIGLSAGNRLLSTSFGPPSDLLTDKVNSHMACATGDAHGSTSLQFAPPPAPKLT
VAAHRLKLSPHGRAQVMRALRQSAPAAVLAPPPRPRSAAMDHPTDEFSLEAIIQLQRSML
EKQWQLPFEDDDDLAEEDDGGKTMTSSVGVVARSGVSARQRRMSGRRRGRSKNGAAAAHL
SISPELLQSRNRIYLRGTVSKELLTHKQVVQLSKKIKDGMWLQQQRSKLKEKLGNEPSYQ
QMAQSLRISTPELRSRMRESFLAREVLTMSNLRLVISIAQKYDKLGVELADLIQGGLIGL
LRGIEKFDASRGFKISTYVYWWIRQGVSRALAENSKTFRLPTYLHERLIAIRGAKYALED
QGISPTTENIAVSLNISEKKVHNATEAVNKVLSLDQQAFPSLNGLPGDTLHSYIEDQNVA
NDPWHGFEEWYLKEEVNKLLDSTLTERERDIIRLYHGIGKQCHTWEDISRQFGLSRERVR
QVGLIAMEKLKHTARRKRLDALLQDY
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgacggccacgcccgcggtgatcggcctgagcgccggcaaccgcctcctgagcacgtcc
ttcgggccgcccagcgacctgctcaccgacaaggtgaatagccacatggcctgcgcgacg
ggggacgcccacggctccacgtcgctgcagttcgcgccgccgccggcgcccaagctcacc
gtcgccgcgcacaggctcaagctctccccgcacggccgcgcgcaggtcatgcgggcgctc
aggcagagcgcgcccgcggccgtgctcgcgccgccgccccgaccacgttcggcagcgatg
gatcatcccaccgacgagttctcgctggaggccatcatccagctgcagaggtccatgctc
gagaagcagtggcagctccccttcgaggacgatgacgacctggccgaggaggacgacggc
ggcaagaccatgacctcctcagtcggcgtcgtggcgcgctccggcgtctccgcaaggcag
agacggatgagcggccggaggcgcgggagatccaagaacggcgccgccgccgcgcacctg
agcatcagccccgagctgctgcagagcaggaaccgtatctacctccggggcaccgtcagc
aaggagctactcacgcacaagcaggttgtccaactctccaagaagatcaaggacggcatg
tggctgcagcagcaaagatcaaagctgaaagagaagctggggaatgagccgtcgtaccag
cagatggcgcagtcgctccggatatcgacgccggagctgaggtccaggatgcgcgagtcc
ttcctcgccagggaggtgctaacgatgagcaacctccgtttggtcatatccatcgcacag
aagtatgataagctgggggtggagctggccgacttgattcagggtggtctgatcgggcta
ctccgtgggatcgagaagtttgatgcatcgaggggtttcaaaatatccacttatgtgtac
tggtggattcgtcagggtgtttcaagagcattggccgagaactcaaaaactttcaggctc
cctacttacctccatgagaggctcattgcaattcgtggtgcaaagtacgcgttggaagac
caaggaatttctccgacaacagagaacatcgcagtgtcgctcaatatatcggaaaagaaa
gtacacaatgctacagaggctgtcaacaaggttctttcattggatcaacaggcatttccc
tccttaaatggtctacctggggatacactccatagttatatagaggatcaaaatgttgcg
aatgatccatggcatggatttgaggagtggtatctcaaggaggaagtcaacaagcttcta
gactcaactctcaccgaacgcgagagggacattattcggttatatcatggtatagggaaa
caatgccatacatgggaggatattagcagacagttcgggttgtcgagagagcgggtgagg
caagtagggctcattgcgatggagaagctgaagcacactgcgaggaggaaaagattggac
gcgctgctccaggactactga
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